RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ZDHHC7Q9NXF8 308 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PIRO00625 290 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 SPTLC1O15269 473 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 TKTP29401 623 aaKnown RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 SERPINB8P50452 374 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 OLIG2Q13516 323 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 DCAF6Q58WW2 860 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 BNIPLQ7Z465 357 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PDSS2Q86YH6 399 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 TP53INP2Q8IXH6 220 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PHTF2Q8N3S3 785 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 OR52K1Q8NGK4 314 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 JADE3Q92613 823 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 FAM149B1Q96BN6 582 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 TUBGCP5Q96RT8 1024 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 ADAMTS10Q9H324 1103 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 SNX25Q9H3E2 840 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 XPO1O14980 1071 aaKnown RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 NCF2P19878 526 aaPredicted RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 DPYSQ14117 519 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 PIGZQ86VD9 579 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 GALNT15Q8N3T1 639 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 NME8Q8N427 588 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 NT5C3BQ969T7 300 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 GORASP1Q9BQQ3 440 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 OXCT2Q9BYC2 517 aaPredicted RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 FAM192AQ9GZU8 254 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 VTA1Q9NP79 307 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 KPNA7A9QM74 516 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CREB3O43889 395 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 RECQL4O94761 1208 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 ZCCHC18P0CG32 403 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 PRDX6P30041 224 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 LIMK2P53671 638 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 ASPHQ12797 758 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 EPGNQ6UW88 154 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 FRMD7Q6ZUT3 714 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CATSPER4Q7RTX7 472 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 PID1Q7Z2X4 250 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 DEFB107AQ8IZN7 70 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 SLC26A7Q8TE54 656 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 ZNF669Q96BR6 464 aaPredicted RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 NPY6RQ99463 290 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CDH19Q9H159 772 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 NXF3Q9H4D5 531 aaKnown RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 EBF3Q9H4W6 596 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 LRRC40Q9H9A6 602 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 COG4Q9H9E3 785 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CYP4F11Q9HBI6 524 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 GDAP2Q9NXN4 497 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
CBX1-202ENST00000393408 GINS2Q9Y248 185 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CDY2AQ9Y6F7 541 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 CDY1Q9Y6F8 540 aa19.29■□□□□ 0.68
CBX1-202ENST00000393408 TSC2P49815 1807 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 SYNJ2BP-COX16A0A087WUM0 186 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 RBM47A0AV96 593 aaKnown RBP19.28■□□□□ 0.68
CBX1-202ENST00000393408 SPRP35270 261 aaPredicted RBP19.28■□□□□ 0.68
CBX1-202ENST00000393408 ADCYAP1R1P41586 468 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 SATB1Q01826 763 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 TMEM62Q0P6H9 643 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 USP4Q13107 963 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 STRA8Q7Z7C7 330 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 ZNF781Q8N8C0 355 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 SHCBP1Q8NEM2 672 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 SH3GL3Q99963 347 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 COX16Q9P0S2 106 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 ADAMTS6Q9UKP5 1117 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 POMPQ9Y244 141 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 SBF1O95248 1867 aa19.28■□□□□ 0.68
CBX1-202ENST00000393408 G3V2L1 256 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 DCLK1O15075 740 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 ZBTB14O43829 449 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 COX4I1P13073 169 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 NOS2P35228 1153 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 GTF2A2P52657 109 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 FSTL4Q6MZW2 842 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 NAPRTQ6XQN6 538 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 CLEC14AQ86T13 490 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 SULF1Q8IWU6 871 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.27■□□□□ 0.68
CBX1-202ENST00000393408 ATXN7L3BQ96GX2 97 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 GBP5Q96PP8 586 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 CCDC28BQ9BUN5 200 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 LOC100653049A0A140TA62 436 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 KCNK1O00180 336 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 EEF2KO00418 725 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 DCXO43602 365 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 RNASEH1O60930 286 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 KRT34O76011 436 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 CALRP27797 417 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 ROR2Q01974 943 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 PPIL2Q13356 520 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 PEX6Q13608 980 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms