RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 C20orf96Q9NUD7 363 aaPredicted RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 SMOXQ9NWM0 555 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 TRIM64A6NGJ6 449 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 TPP1O14773 563 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 VAPBO95292 243 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 ACO1P21399 889 aaKnown RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 TTKP33981 857 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 TPTEP56180 551 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 MCCD1P59942 119 aaPredicted RBP17.48■□□□□ 0.39
PTPA-207ENST00000393370 ART3Q13508 389 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 NEDD8Q15843 81 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 DNAJC24Q6P3W2 148 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 NPNTQ6UXI9 565 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 KCTD8Q6ZWB6 473 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 HERC6Q8IVU3 1022 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 COPG2Q9UBF2 871 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 SLC27A5Q9Y2P5 690 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 IFT52Q9Y366 437 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 TRAF6Q9Y4K3 522 aa17.48■□□□□ 0.39
PTPA-207ENST00000393370 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 E2F8A0AVK6 867 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 FAM159BA6NKW6 160 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 TNFRSF10AO00220 468 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CHADO15335 359 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 GLRA3O75311 464 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 JRKO75564 520 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CLPXO76031 633 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 BCL10O95999 233 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 MATN1P21941 496 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 STXBP5Q5T5C0 1151 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 PPP2R2DQ66LE6 453 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 TIFABQ6ZNK6 161 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CHSY3Q70JA7 882 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 RFX6Q8HWS3 928 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 DEPDC1BQ8WUY9 529 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 DNMT3BQ9UBC3 853 aaKnown RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 DKK3Q9UBP4 350 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 SLC9A2Q9UBY0 812 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 PCDHB4Q9Y5E5 795 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 C9IYK1 514 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 PSMD11O00231 422 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CLIC3O95833 236 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 KDELR1P24390 212 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 HPCAL1P37235 193 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 OPRL1P41146 370 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 ADAM17P78536 824 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 E2F2Q14209 437 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 PGS1Q32NB8 556 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 DARS2Q6PI48 645 aaKnown RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 USP43Q70EL4 1123 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 FRA10AC1Q70Z53 315 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CHST15Q7LFX5 561 aaPredicted RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 UNC5BQ8IZJ1 945 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 TERB1Q8NA31 727 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 ZNF516Q92618 1163 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 CNDP1Q96KN2 507 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 NPAS2Q99743 824 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 KIFC3Q9BVG8 833 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 FRMD8P1Q9BZ68 369 aaPredicted RBP17.47■□□□□ 0.39
PTPA-207ENST00000393370 TMEM216Q9P0N5 145 aa17.47■□□□□ 0.39
PTPA-207ENST00000393370 TCRBV5S1A1TA0A578 114 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 NOTOA8MTQ0 251 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 WDR64B1ANS9 1081 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 GCATO75600 419 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 CHEK2O96017 543 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 MAPTP10636 758 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 HNRNPFP52597 415 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 TNK2Q07912 1038 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 CYP24A1Q07973 514 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 PPM1JQ5JR12 505 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 AGAP7PQ5VUJ5 663 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 TRMT1LQ7Z2T5 733 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 MPP5Q8N3R9 675 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 ARFGAP1Q8N6T3 406 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 MFSD14AQ96MC6 490 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 MTG1Q9BT17 334 aaPredicted RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 SMARCAD1Q9H4L7 1026 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 ZNF358Q9NW07 568 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 ADA2Q9NZK5 511 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 CDY2AQ9Y6F7 541 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 CDY1Q9Y6F8 540 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 DLGAP1O14490 977 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 ADORA2AP29274 412 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 SLC25A11Q02978 314 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 DNASE1L3Q13609 305 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 NAPRTQ6XQN6 538 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 DSG4Q86SJ6 1040 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 ITIH5Q86UX2 942 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 FBXO11Q86XK2 927 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 PPWD1Q96BP3 646 aaKnown RBP17.46■□□□□ 0.39
PTPA-207ENST00000393370 ASB9Q96DX5 294 aa17.46■□□□□ 0.39
PTPA-207ENST00000393370 PCDHB12Q9Y5F1 795 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms