RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 GKN1Q9NS71 199 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 MARCH2Q9P0N8 246 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 TTLL3Q9Y4R7 772 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 TEX264Q9Y6I9 313 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 SRRM3A6NNA2 597 aaPredicted RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 E7EVH7 732 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 NRG2O14511 850 aaPredicted RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 KIF1CO43896 1103 aaKnown RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 PARNO95453 639 aaKnown RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 JCHAINP01591 159 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 SOD2P04179 222 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 GARSP41250 739 aaKnown RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 AIF1P55008 147 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 TNFAIP8L3Q5GJ75 292 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 MANEALQ5VSG8 457 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 CES3Q6UWW8 571 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 CFAP52Q8N1V2 620 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 ZSCAN18Q8TBC5 510 aaPredicted RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 BADQ92934 168 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 ARHGEF2Q92974 986 aaKnown RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 TMEM109Q9BVC6 243 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 KLHL8Q9P2G9 620 aaPredicted RBP15.36■□□□□ 0.05
MKS1-202ENST00000393119 SLC17A6Q9P2U8 582 aa15.36■□□□□ 0.05
MKS1-202ENST00000393119 A0A1W2PPM1 405 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 TTC24A2A3L6 582 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 LCHNA4D1U4 455 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 UGT1A9O60656 530 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 MDH1P40925 334 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 HCAR3P49019 387 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 GLUD2P49448 558 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 MLLT6P55198 1093 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 SESN2P58004 480 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 RFWD3Q6PCD5 774 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 SRRM1Q8IYB3 904 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 CNTD1Q8N815 330 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 SERPINB11Q96P15 392 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 XPO6Q96QU8 1125 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 UGT1A7Q9HAW7 530 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 UGT1A10Q9HAW8 530 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 UGT1A8Q9HAW9 530 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 PPANQ9NQ55 473 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 TLR6Q9Y2C9 796 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 MAD1L1Q9Y6D9 718 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 CAPN7Q9Y6W3 813 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 REV3LO60673 3130 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 C2orf78A6NCI8 922 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 CXorf49A8MYA2 514 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 HSPA1AP0DMV8 641 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 HSPA1BP0DMV9 641 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 HMGA1P17096 107 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 NADSYN1Q6IA69 706 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 TRMT10BQ6PF06 316 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 HAPLN3Q96S86 360 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 KLF6Q99612 283 aaPredicted RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 C12orf65Q9H3J6 166 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 NOL6Q9H6R4 1146 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 TLR8Q9NR97 1041 aaKnown RBP15.35■□□□□ 0.05
MKS1-202ENST00000393119 EURLQ9NYK6 297 aa15.35■□□□□ 0.05
MKS1-202ENST00000393119 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 PPP1R12AO14974 1030 aaPredicted RBP15.34■□□□□ 0.05
MKS1-202ENST00000393119 SPAG7O75391 227 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 CHN1P15882 459 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 PPIDQ08752 370 aaKnown RBP15.34■□□□□ 0.05
MKS1-202ENST00000393119 GALNT2Q10471 571 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 PLD1Q13393 1074 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 BRMS1LQ5PSV4 323 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 KDELC2Q7Z4H8 507 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 SPATA22Q8NHS9 363 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 ZNF461Q8TAF7 563 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 RNF38Q9H0F5 515 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 SMYD2Q9NRG4 433 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 TCRBV9S1A1TA0A576 114 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 RASSF9O75901 435 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 NFKB1P19838 968 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 DSG1Q02413 1049 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 SEMA5AQ13591 1074 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 PPP2R5DQ14738 602 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 KBTBD12Q3ZCT8 623 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 FBXL22Q6P050 247 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 MSANTD2Q6P1R3 559 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 ZNF683Q8IZ20 524 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 C4orf33Q8N1A6 199 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 ANKRD42Q8N9B4 389 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 MAML1Q92585 1016 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 FOXP3Q9BZS1 431 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 ROPN1BQ9BZX4 212 aaPredicted RBP15.34■□□□□ 0.05
MKS1-202ENST00000393119 ROPN1Q9HAT0 212 aaPredicted RBP15.34■□□□□ 0.05
MKS1-202ENST00000393119 ACTL7AQ9Y615 435 aa15.34■□□□□ 0.05
MKS1-202ENST00000393119 EYSQ5T1H1 3165 aa15.33■□□□□ 0.05
MKS1-202ENST00000393119 CCDC78A2IDD5 438 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms