RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ARL8BQ9NVJ2 186 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 C2CD2LO14523 706 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 LTFP02788 710 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CPA3P15088 417 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 PAMP19021 973 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 OR1G1P47890 313 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 EML3Q32P44 896 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 MFSD14CQ5VZR4 134 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ANO7Q6IWH7 933 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ACAD11Q709F0 780 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CTU1Q7Z7A3 348 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 TTC7BQ86TV6 843 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 LRRC39Q96DD0 335 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ELMO2Q96JJ3 720 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 SNX27Q96L92 541 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 NAT9Q9BTE0 207 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 Q9H521 79 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ZNF395Q9H8N7 513 aaPredicted RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 PTPRHQ9HD43 1115 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 XPNPEP3Q9NQH7 507 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 RGS17Q9UGC6 210 aaPredicted RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 IPO11Q9UI26 975 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 CPB1P15086 417 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 SLC1A6P48664 564 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 AP2B1P63010 937 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 MRPS5P82675 430 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 NMUR2Q9GZQ4 415 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 SYBUQ9NX95 663 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 DTLQ9NZJ0 730 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 OR12D3Q9UGF7 316 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 LSM1O15116 133 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 CSH1P0DML2 217 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CSH2P0DML3 217 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 GP5P40197 560 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 LHX1P48742 406 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 PCYT1AP49585 367 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 LILRA4P59901 499 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 CBX3Q13185 183 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 SLC26A9Q7LBE3 791 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 TFAP2DQ7Z6R9 452 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 BANPQ8N9N5 519 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 APBA2Q99767 749 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 DCDC2Q9UHG0 476 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 TSR3Q9UJK0 312 aaKnown RBP10.78□□□□□ -0.68
CALD1-203ENST00000393118 SNX10Q9Y5X0 201 aa10.78□□□□□ -0.68
CALD1-203ENST00000393118 ZBTB42B2RXF5 422 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 PHGDHO43175 533 aaKnown RBP10.77□□□□□ -0.68
CALD1-203ENST00000393118 TOP3BO95985 862 aaKnown RBP10.77□□□□□ -0.68
CALD1-203ENST00000393118 ODC1P11926 461 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 ENO3P13929 434 aaPredicted RBP10.77□□□□□ -0.68
CALD1-203ENST00000393118 PGAM1P18669 254 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 CXorf38Q8TB03 319 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 DCAKDQ8WVC6 231 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 PGLYRP2Q96PD5 576 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.68
CALD1-203ENST00000393118 ARHGEF4Q9NR80 690 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 CHST12Q9NRB3 414 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 CDY2AQ9Y6F7 541 aa10.77□□□□□ -0.68
CALD1-203ENST00000393118 A0A096LPK6 155 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 CNMDO75829 334 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 TCN1P20061 433 aaPredicted RBP10.77□□□□□ -0.69
CALD1-203ENST00000393118 SERPINB5P36952 375 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 RGS2P41220 211 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 SLC25A52Q3SY17 297 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 FAM13CQ8NE31 585 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 PPHLN1Q8NEY8 458 aaKnown RBP10.77□□□□□ -0.69
CALD1-203ENST00000393118 BRI3BPQ8WY22 251 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 ANKRD27Q96NW4 1050 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 TRAPPC9Q96Q05 1148 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 DUSP16Q9BY84 665 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 MAF1Q9H063 256 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 PFDN4Q9NQP4 134 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 SSX2IPQ9Y2D8 614 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 BCLAF3A2AJT9 711 aaKnown RBP10.77□□□□□ -0.69
CALD1-203ENST00000393118 MDM4O15151 490 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 GJA8P48165 433 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 PHEXP78562 749 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 DNAL1Q4LDG9 190 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 KLC3Q6P597 504 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 SYT17Q9BSW7 474 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 CYP4F12Q9HCS2 524 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 THAP1Q9NVV9 213 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 NMRK1Q9NWW6 199 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 THEGQ9P2T0 379 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 ST3GAL5Q9UNP4 418 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 PCDHA11Q9Y5I1 949 aa10.77□□□□□ -0.69
CALD1-203ENST00000393118 COL11A2P13942 1736 aaPredicted RBP10.77□□□□□ -0.69
CALD1-203ENST00000393118 ARHGEF37A1IGU5 675 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 F9P00740 461 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 IMPDH2P12268 514 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 NFKB1P19838 968 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 AXLP30530 894 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 L1CAMP32004 1257 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 GALK1P51570 392 aa10.76□□□□□ -0.69
CALD1-203ENST00000393118 COPAP53621 1224 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms