RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SLC20A2Q08357 652 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LY6KQ17RY6 165 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 ATP13A4Q4VNC1 1196 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 PCDH20Q8N6Y1 951 aaKnown RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 ASB2Q96Q27 587 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CEP44Q9C0F1 390 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TPRKBQ9Y3C4 175 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CNTNAP2Q9UHC6 1331 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 PTGES3LE9PB15 166 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 KPNA4O00629 521 aaPredicted RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 FAM20BO75063 409 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 DDR2Q16832 855 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 PRRG3Q9BZD7 231 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 DYRK1BQ9Y463 629 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 TPP1O14773 563 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SPTLC1O15269 473 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 RAD51BO15315 384 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 HS6ST1O60243 411 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 MSH3P20585 1137 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 HUNKP57058 714 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 NEPROQ6NW34 567 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 PLEKHH3Q7Z736 793 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 RNF180Q86T96 592 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 IDI2Q9BXS1 227 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SEMA6AQ9H2E6 1030 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SLCO1B3Q9NPD5 702 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 A0A0A0MRY4 1105 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 OPLAHO14841 1288 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 CAPZA2P47755 286 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 ARL4DP49703 201 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 KPNA1P52294 538 aaPredicted RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 C21orf59P57076 290 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 DCTN2Q13561 401 aaKnown RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 ALLCQ8N6M5 410 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SPATA13Q96N96 652 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 KLHL3Q9UH77 587 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 FSCN2O14926 492 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 TSHRP16473 764 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 LRPAP1P30533 357 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 ABCG1P45844 678 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 GTF2BQ00403 316 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 IRF2BP2Q7Z5L9 587 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 NET1Q7Z628 596 aaPredicted RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 BHLHE22Q8NFJ8 381 aaPredicted RBP13.37□□□□□ -0.27
LCA5-202ENST00000392959 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
LCA5-202ENST00000392959 ABCA9Q8IUA7 1624 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 VPS4BO75351 444 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 PSMD10O75832 226 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 KRT36O76013 467 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ADRB2P07550 413 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 AKAP5P24588 427 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 CHKAP35790 457 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 TALDO1P37837 337 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 TBX4P57082 545 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 FMO1Q01740 532 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 NRF1Q16656 503 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 RSBN1Q5VWQ0 802 aaPredicted RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 RETSATQ6NUM9 610 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 PGBD3Q8N328 593 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 ACSS3Q9H6R3 686 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 LNPEPQ9UIQ6 1025 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 PADI4Q9UM07 663 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 ADARP55265 1226 aaKnown RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 TRIM25Q14258 630 aaKnown RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 IL17AQ16552 155 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ARHGAP15Q53QZ3 475 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 RINLQ6ZS11 566 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 POLNQ7Z5Q5 900 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms