RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 ERVK-5Q9HDB9 667 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 THRAP10827 490 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 EEF1DP29692 281 aaKnown RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 RPA3P35244 121 aaPredicted RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 HECTD3Q5T447 861 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TPGS1Q6ZTW0 290 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 PWWP2AQ96N64 755 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TPP1O14773 563 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 RNASEH1O60930 286 aaKnown RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SEC24DO94855 1032 aaPredicted RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 IGSF6O95976 241 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 MMP8P22894 467 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 ADSSP30520 456 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 FUT11Q495W5 492 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 CACHD1Q5VU97 1274 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SNX27Q96L92 541 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SLC7A5P2Q9GIP4 190 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 CCDC90BQ9GZT6 254 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TAGLN3Q9UI15 199 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 DOLKQ9UPQ8 538 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 ASGR1P07306 291 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TPBGLP0DKB5 382 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 NFKB1P19838 968 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SERPINH1P50454 418 aaKnown RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 ZYG11BQ9C0D3 744 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 MORF4L1Q9UBU8 362 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 ERI2A8K979 691 aaKnown RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 XYLBO75191 536 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
SCN3B-202ENST00000392770 CD86P42081 329 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 STX5Q13190 355 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 FLOT2Q14254 428 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TMEM199Q8N511 208 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 ITGA9Q13797 1035 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TEX9Q8N6V9 391 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 TEX12Q9BXU0 123 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 RXFP1Q9HBX9 757 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SIX2Q9NPC8 291 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SEPT3Q9UH03 358 aa16.92■□□□□ 0.3
SCN3B-202ENST00000392770 SLCO1B7G3V0H7 640 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 C22orf31O95567 290 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SERPINE1P05121 402 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 CYLC2Q14093 348 aaPredicted RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SUGP1Q8IWZ8 645 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 MREGQ8N565 214 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 CD99L2Q8TCZ2 262 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 PHF21BQ96EK2 531 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 CCNB1P14635 433 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 PSEN1P49768 467 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 EME1Q96AY2 570 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 WARS2Q9UGM6 360 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 HSPA1AP0DMV8 641 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 HSPA1BP0DMV9 641 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 CALB2P22676 271 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SOAT1P35610 550 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 LZICQ8WZA0 190 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 IL22Q9GZX6 179 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 CNGB3Q9NQW8 809 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SP2Q02086 613 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 TUSC3Q13454 348 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SLC25A52Q3SY17 297 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 LGMNQ99538 433 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 ALADP13716 330 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 PCID2Q5JVF3 399 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
SCN3B-202ENST00000392770 PADI3Q9ULW8 664 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 PCDHGC3Q9UN70 934 aa16.91■□□□□ 0.3
SCN3B-202ENST00000392770 UBOX5O94941 541 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 SKOR1P84550 965 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 BCL2L1Q07817 233 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DEFB118Q96PH6 123 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 SFMBT1Q9UHJ3 866 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 MYO1GB0I1T2 1018 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 NT5C1B-RDH14C9J2C7 533 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 PABPC1LQ4VXU2 614 aaKnown RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 ZNF75CPQ92670 426 aaPredicted RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 PCDH18Q9HCL0 1135 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 V9GYQ6 96 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DPEP3Q9H4B8 488 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 SALL4Q9UJQ4 1053 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 CHRNB2P17787 502 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 TFE3P19532 575 aaPredicted RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DRG2P55039 364 aaKnown RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 AUHQ13825 339 aaKnown RBP16.9■□□□□ 0.3
SCN3B-202ENST00000392770 TRIP10Q15642 601 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 CYB5D1Q6P9G0 228 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 C11orf96Q7Z7L8 435 aa16.9■□□□□ 0.3
SCN3B-202ENST00000392770 DAW1Q8N136 415 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms