RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 CEP57Q86XR8 500 aa19■□□□□ 0.63
STRADB-202ENST00000392249 DCP1BQ8IZD4 617 aaKnown RBP19■□□□□ 0.63
STRADB-202ENST00000392249 SRPK1Q96SB4 655 aaKnown RBP19■□□□□ 0.63
STRADB-202ENST00000392249 PLCD4Q9BRC7 762 aa19■□□□□ 0.63
STRADB-202ENST00000392249 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
STRADB-202ENST00000392249 IQCGQ9H095 443 aaKnown RBP19■□□□□ 0.63
STRADB-202ENST00000392249 BRD8Q9H0E9 1235 aa19■□□□□ 0.63
STRADB-202ENST00000392249 VPS11Q9H270 941 aa19■□□□□ 0.63
STRADB-202ENST00000392249 SLC12A4Q9UP95 1085 aa19■□□□□ 0.63
STRADB-202ENST00000392249 MRPL42Q9Y6G3 142 aaKnown RBP19■□□□□ 0.63
STRADB-202ENST00000392249 HMX2A2RU54 273 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 PAGE1O75459 146 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 RFPL1O75677 317 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 ALDH1A2O94788 518 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 CCR1P32246 355 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 GRK4P32298 578 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 VARS2Q5ST30 1063 aaKnown RBP18.99■□□□□ 0.63
STRADB-202ENST00000392249 TTC17Q96AE7 1141 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 FTHL17Q9BXU8 183 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 GBA3Q9H227 469 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 OSER1Q9NX31 292 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 MTSS1O43312 755 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 NBNO60934 754 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 ZNF189O75820 626 aaPredicted RBP18.99■□□□□ 0.63
STRADB-202ENST00000392249 AP2A1O95782 977 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 MOCS2O96007 188 aaPredicted RBP18.99■□□□□ 0.63
STRADB-202ENST00000392249 DHRS4L1P0CG22 281 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 SELPP16109 830 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 NFKB1P19838 968 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 CYP2C18P33260 490 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 TTC31Q49AM3 519 aaPredicted RBP18.99■□□□□ 0.63
STRADB-202ENST00000392249 TEX44Q53QW1 395 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 BRMS1LQ5PSV4 323 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 CES3Q6UWW8 571 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 OTOAQ7RTW8 1153 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 ABI1Q8IZP0 508 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 FITM2Q8N6M3 262 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 PTPRN2Q92932 1015 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 B3GALT6Q96L58 329 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 SLC13A1Q9BZW2 595 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 IL1RAPL1Q9NZN1 696 aa18.99■□□□□ 0.63
STRADB-202ENST00000392249 DFFAO00273 331 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 GATMP50440 423 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 RNF43Q68DV7 783 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 CYS1Q717R9 158 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 DBF4BQ8NFT6 615 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 MTBPQ96DY7 904 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 HAPLN3Q96S86 360 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 MANSC1Q9H8J5 431 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 JCHAINP01591 159 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 NIPAL4Q0D2K0 466 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 NFE2Q16621 373 aaPredicted RBP18.98■□□□□ 0.63
STRADB-202ENST00000392249 ARHGAP36Q6ZRI8 547 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 CCNJLQ8IV13 435 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.98■□□□□ 0.63
STRADB-202ENST00000392249 TTC9BQ8N6N2 239 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 DNAAF3Q8N9W5 541 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 FCRL2Q96LA5 508 aaPredicted RBP18.98■□□□□ 0.63
STRADB-202ENST00000392249 NAT9Q9BTE0 207 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 MLPHQ9BV36 600 aaPredicted RBP18.98■□□□□ 0.63
STRADB-202ENST00000392249 PCMTD2Q9NV79 361 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 TRHDEQ9UKU6 1024 aa18.98■□□□□ 0.63
STRADB-202ENST00000392249 TET1Q8NFU7 2136 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 ARHGAP42A6NI28 874 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 GSTA1P08263 222 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 SERPINB9P50453 376 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 CTXN3Q4LDR2 81 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 FAM171A1Q5VUB5 890 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 ITPRIPL1Q6GPH6 555 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 MARK2Q7KZI7 788 aaKnown RBP18.97■□□□□ 0.63
STRADB-202ENST00000392249 CNPY4Q8N129 248 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 NUP93Q8N1F7 819 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 ATAD1Q8NBU5 361 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 GPR152Q8TDT2 470 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 USP33Q8TEY7 942 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 CDKL2Q92772 493 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 FUBP3Q96I24 572 aaKnown RBP eCLIP18.97■□□□□ 0.63
STRADB-202ENST00000392249 RXFP1Q9HBX9 757 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 HAUS2Q9NVX0 235 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 UBP1Q9NZI7 540 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 HCSTQ9UBK5 93 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 ADAM28Q9UKQ2 775 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 VANGL2Q9ULK5 521 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 RPS6KL1Q9Y6S9 549 aa18.97■□□□□ 0.63
STRADB-202ENST00000392249 POLBP06746 335 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 NEFHP12036 1026 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 CCNFP41002 786 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 USP46P62068 366 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 GPNMBQ14956 572 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 KCTD11Q693B1 232 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 SLAIN1Q8ND83 568 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 ZSCAN18Q8TBC5 510 aaPredicted RBP18.96■□□□□ 0.63
STRADB-202ENST00000392249 DPF3Q92784 378 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 APBB2Q92870 758 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 TEKT5Q96M29 485 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 VAT1Q99536 393 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 APOL2Q9BQE5 337 aa18.96■□□□□ 0.63
STRADB-202ENST00000392249 MAGED2Q9UNF1 606 aaPredicted RBP18.96■□□□□ 0.63
STRADB-202ENST00000392249 PHF24Q9UPV7 400 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms