RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ADHFE1Q8IWW8 467 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 ETNPPLQ8TBG4 499 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 MRPL48Q96GC5 212 aaKnown RBP16.46■□□□□ 0.22
SHANK1-204ENST00000391814 CDH9Q9ULB4 789 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 SERPINA6P08185 405 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SQLEQ14534 574 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 C5orf22Q49AR2 442 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SEPT5Q99719 369 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 APBA2Q99767 749 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ARMC7Q9H6L4 198 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 NMRAL1Q9HBL8 299 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 RCCD1A6NED2 376 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PLK1P53350 603 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ART4Q93070 314 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ADSLP30566 484 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 BLMHQ13867 455 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 AAGABQ6PD74 315 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SLC41A1Q8IVJ1 513 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF614Q8N883 585 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PWWP2AQ96N64 755 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 TARS2Q9BW92 718 aaKnown RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 DDIT4Q9NX09 232 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 DOLKQ9UPQ8 538 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SNAP91O60641 907 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 CRABP2P29373 138 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PSME3P61289 254 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 MSL3Q8N5Y2 521 aaKnown RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 CLPTM1LQ96KA5 538 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SPAG4Q9NPE6 437 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 UBA2Q9UBT2 640 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 TP73O15350 636 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 CD4P01730 458 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ERVK-10P10266 1014 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 RASA1P20936 1047 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 HALP42357 657 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PPATQ06203 517 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 MACC1Q6ZN28 852 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 FAM126BQ8IXS8 530 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF671Q8TAW3 534 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 CASZ1Q86V15 1759 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PSMD12O00232 456 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 SEC22BO75396 215 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 NADKO95544 446 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-204ENST00000391814 PRKAR1AP10644 381 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 TEKT5Q96M29 485 aa16.45■□□□□ 0.22
SHANK1-204ENST00000391814 A0A087X1B8 175 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TMCC2O75069 709 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 VPS4BO75351 444 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 GJB6O95452 261 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 ITGB6P18564 788 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MSH3P20585 1137 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 CD151P48509 253 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 NDUFAF6Q330K2 333 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 DUSP9Q99956 384 aaKnown RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 IKZF3Q9UKT9 509 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 FADS2O95864 444 aaKnown RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 AKAP5P24588 427 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 RTP1P59025 263 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TRAP1Q12931 704 aaKnown RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TIGD7Q6NT04 549 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 SLCO1B3Q9NPD5 702 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MTF2Q9Y483 593 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 FAM86B1E9PN63 330 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 LOC110117498-PIK3R3F6TDL0 507 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TRMUO75648 421 aaKnown RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 NFICP08651 508 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MAPKAPK2P49137 400 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 KBTBD8Q8NFY9 601 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MYDGFQ969H8 173 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 REXO5Q96IC2 774 aaKnown RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 SPTLC1O15269 473 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 XIAPP98170 497 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TTLL9Q3SXZ7 439 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 TIMM50Q3ZCQ8 353 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 YAF2Q8IY57 180 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 RXFP2Q8WXD0 754 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MAGEB10Q96LZ2 347 aaPredicted RBP16.44■□□□□ 0.22
SHANK1-204ENST00000391814 PDCD10Q9BUL8 212 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 MECRQ9BV79 373 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 REEP1Q9H902 201 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 GSTK1Q9Y2Q3 226 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 COL15A1P39059 1388 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 CYP4B1P13584 511 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 ARPC4P59998 168 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 DPYSL3Q14195 570 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 NAT9Q9BTE0 207 aa16.44■□□□□ 0.22
SHANK1-204ENST00000391814 LYNP07948 512 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 RXRGP48443 463 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms