RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SMCR8Q8TEV9 937 aaPredicted RBP1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 DIS3LQ8TF46 1054 aaKnown RBP1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 ADGRG7Q96K78 797 aa1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 FAM227BQ96M60 508 aa1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 SMAD5Q99717 465 aaKnown RBP1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 PYGO2Q9BRQ0 406 aa1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 ABHD14AQ9BUJ0 271 aa1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 CAPN11Q9UMQ6 739 aa1.62□□□□□ -2.15
RNU6-239P-201ENST00000390990 SAA2-SAA4A0A096LPE2 208 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 H3BML4 177 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 M0QZQ0 153 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 SYT5O00445 386 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 KIF1CO43896 1103 aaKnown RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 KAT7O95251 611 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ALADP13716 330 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF10P21506 573 aaPredicted RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 TNFSF8P32971 234 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 EVA1CP58658 441 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 RPS16P62249 146 aaKnown RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC25A41Q8N5S1 370 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 EXD3Q8N9H8 876 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 LRRC8CQ8TDW0 803 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 NMD3Q96D46 503 aaKnown RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF414Q96IQ9 312 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 WDR24Q96S15 920 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC25A33Q9BSK2 321 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ASPSCR1Q9BZE9 553 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZCWPW1Q9H0M4 648 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF696Q9H7X3 374 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 PNRC2Q9NPJ4 139 aaKnown RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 MALT1Q9UDY8 824 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 LUC7L2Q9Y383 392 aaKnown RBP1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 SPEF1Q9Y4P9 236 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 WASHC2CQ9Y4E1 1318 aa1.61□□□□□ -2.15
RNU6-239P-201ENST00000390990 LDB2O43679 373 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 CNTN5O94779 1100 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 AFPP02771 609 aaKnown RBP1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 FGF5P12034 268 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZKSCAN1P17029 563 aaPredicted RBP1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 GNLYP22749 145 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 MMP8P22894 467 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 THPOP40225 353 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 NUDT6P53370 316 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 LMO4P61968 165 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 SEMA3BQ13214 749 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 SNTA1Q13424 505 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 LPAL2Q16609 132 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF284Q2VY69 593 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 TMEM196Q5HYL7 178 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 PLA2G4FQ68DD2 849 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 UNC13DQ70J99 1090 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 TRMT1LQ7Z2T5 733 aaKnown RBP1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 CAMK1DQ8IU85 385 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 EPHX4Q8IUS5 362 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 YAF2Q8IY57 180 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 NEK9Q8TD19 979 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 GLMPQ8WWB7 406 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 SORCS1Q8WY21 1168 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 CD101Q93033 1021 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 RUNDC1Q96C34 613 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 SUCLG2Q96I99 432 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 EGFL8Q99944 293 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 B3GNT4Q9C0J1 378 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC25A32Q9H2D1 315 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 PRDM16Q9HAZ2 1276 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 RXFP3Q9NSD7 469 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 DDX43Q9NXZ2 648 aaKnown RBP1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 RGS17Q9UGC6 210 aaPredicted RBP1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 ITGB1BP2Q9UKP3 347 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 PRKAB1Q9Y478 270 aa1.6□□□□□ -2.15
RNU6-239P-201ENST00000390990 MAGEA13PA6NCF6 341 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 CAPN8A6NHC0 703 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 STMND1H3BQB6 276 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 OFD1O75665 1012 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 SOX30O94993 753 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 TGM2P21980 687 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 DGKAP23743 735 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 CSRP3P50461 194 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 SLC37A1P57057 533 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 TMPRSS3P57727 454 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 PHEXP78562 749 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 ALG10Q5BKT4 473 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 ALG10BQ5I7T1 473 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 IFIT1BQ5T764 474 aaKnown RBP1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 TMEM71Q6P5X7 295 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 GIMAP6Q6P9H5 292 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 C16orf89Q6UX73 402 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 GDPD4Q6W3E5 623 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF497Q6ZNH5 498 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 CLASRPQ8N2M8 674 aaKnown RBP1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 TAS1R2Q8TE23 839 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 IP6K1Q92551 441 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 NUP88Q99567 741 aaPredicted RBP1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 C22orf23Q9BZE7 217 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 ZNF304Q9HCX3 659 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 AFF4Q9UHB7 1163 aaKnown RBP1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 RAI2Q9Y5P3 530 aa1.59□□□□□ -2.15
RNU6-239P-201ENST00000390990 IGLV5-37A0A075B6J1 123 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms