RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SLC8A3P57103 927 aa10□□□□□ -0.81
IFT88-203ENST00000389373 INCA1Q0VD86 236 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ZACNQ401N2 412 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ZNF542PQ5EBM4 170 aa10□□□□□ -0.81
IFT88-203ENST00000389373 PIK3R6Q5UE93 754 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CEP135Q66GS9 1140 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ZNF574Q6ZN55 896 aaPredicted RBP10□□□□□ -0.81
IFT88-203ENST00000389373 IQCHQ86VS3 1027 aa10□□□□□ -0.81
IFT88-203ENST00000389373 IFI44Q8TCB0 444 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ARRDC3Q96B67 414 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ATXN7L3BQ96GX2 97 aa10□□□□□ -0.81
IFT88-203ENST00000389373 APOLD1Q96LR9 279 aa10□□□□□ -0.81
IFT88-203ENST00000389373 SLC46A1Q96NT5 459 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CALN1Q9BXU9 219 aa10□□□□□ -0.81
IFT88-203ENST00000389373 BLZF1Q9H2G9 400 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CYP3A43Q9HB55 503 aa10□□□□□ -0.81
IFT88-203ENST00000389373 APOBEC3GQ9HC16 384 aaKnown RBP10□□□□□ -0.81
IFT88-203ENST00000389373 KBTBD4Q9NVX7 518 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ARHGAP20Q9P2F6 1191 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
IFT88-203ENST00000389373 ANKMY1Q9P2S6 941 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CYTH4Q9UIA0 394 aa10□□□□□ -0.81
IFT88-203ENST00000389373 SLCO3A1Q9UIG8 710 aa10□□□□□ -0.81
IFT88-203ENST00000389373 INTS6Q9UL03 887 aaKnown RBP10□□□□□ -0.81
IFT88-203ENST00000389373 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
IFT88-203ENST00000389373 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
IFT88-203ENST00000389373 MGAQ8IWI9 3026 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 TYW5A2RUC4 315 aaKnown RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 PRAMEF26H0Y7S4 382 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 TULP2O00295 520 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 TERTO14746 1132 aaKnown RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 SLC31A1O15431 190 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 LATO43561 262 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 MOCS3O95396 460 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 MZF1P28698 734 aaPredicted RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 SLC6A4P31645 630 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 SLC11A2P49281 568 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 METAP1P53582 386 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 CLDN10P78369 228 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 KCNMA1Q12791 1236 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 OVGP1Q12889 678 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 CDH18Q13634 790 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 ISXQ2M1V0 245 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 LINC00303Q3SY05 128 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 PITRM1Q5JRX3 1037 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 RAB41Q5JT25 222 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 BSPRYQ5W0U4 402 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 CRTC1Q6UUV9 634 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 USP53Q70EK8 1073 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 C12orf56Q8IXR9 622 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 CFAP52Q8N1V2 620 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 ZNF557Q8N988 423 aaPredicted RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 FIBINQ8TAL6 211 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 EXTL1Q92935 676 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 IPO9Q96P70 1041 aaKnown RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 CCNL2Q96S94 520 aaPredicted RBP9.99□□□□□ -0.81
IFT88-203ENST00000389373 LRRC4Q9HBW1 653 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 EVA1BQ9NVM1 165 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 STOML2Q9UJZ1 356 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 DMTF1Q9Y222 760 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
IFT88-203ENST00000389373 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 A0A1W2PNU3 283 aaPredicted RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 PMS2P1A4D2B8 440 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ACSL4O60488 711 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 PIAS2O75928 621 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 NEBLO76041 1014 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 TNFSF15O95150 251 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 LATS1O95835 1130 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 SRPRAP08240 638 aaKnown RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 VAV1P15498 845 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 PRLRP16471 622 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ZNF18P17022 549 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 TGM2P21980 687 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 DRD3P35462 400 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 NNMTP40261 264 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 STK19P49842 368 aaPredicted RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 RPS24P62847 133 aaKnown RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 ECT2LQ008S8 904 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ADIGQ0VDE8 80 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 CLN3Q13286 438 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 RABEP1Q15276 862 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 CDKN3Q16667 212 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ARL13BQ3SXY8 428 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ACCSLQ4AC99 568 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 SETMARQ53H47 684 aaPredicted RBP9.98□□□□□ -0.81
IFT88-203ENST00000389373 FSCBQ5H9T9 825 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 MPP7Q5T2T1 576 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 PM20D1Q6GTS8 502 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 UNC45BQ8IWX7 931 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 APCDD1Q8J025 514 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 ARL14Q8N4G2 192 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 TATDN2Q93075 761 aa9.98□□□□□ -0.81
IFT88-203ENST00000389373 LMLNQ96KR4 655 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms