RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 TTC31Q49AM3 519 aaPredicted RBP18.8■□□□□ 0.6
CD9-204ENST00000382519 C2CD6Q53TS8 623 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 OTUD1Q5VV17 481 aaPredicted RBP18.8■□□□□ 0.6
CD9-204ENST00000382519 ZNF776Q68DI1 518 aaPredicted RBP18.8■□□□□ 0.6
CD9-204ENST00000382519 FBXL22Q6P050 247 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 DHX40Q8IX18 779 aaKnown RBP18.8■□□□□ 0.6
CD9-204ENST00000382519 APCDD1Q8J025 514 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 MYO19Q96H55 970 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 MRGPRX3Q96LB0 322 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 MIR1-1HGQ9H1L0 117 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 CAPN10Q9HC96 672 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 RRN3Q9NYV6 651 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
CD9-204ENST00000382519 PAGE1O75459 146 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 TFE3P19532 575 aaPredicted RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 GABRB2P47870 512 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 RPS14P62263 151 aaKnown RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 MTA1Q13330 715 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 AUHQ13825 339 aaKnown RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 HNRNPA1L2Q32P51 320 aaKnown RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 N4BP2L1Q5TBK1 243 aaPredicted RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 DCAF12L1Q5VU92 463 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 SND1Q7KZF4 910 aaKnown RBP eCLIP18.79■□□□□ 0.61e-7■■■■□ 24.8
CD9-204ENST00000382519 XYLT1Q86Y38 959 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 ZCCHC9Q8N567 271 aaKnown RBP18.79■□□□□ 0.6
CD9-204ENST00000382519 CADM4Q8NFZ8 388 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 SLC20A1Q8WUM9 679 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 CPA5Q8WXQ8 436 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 SNX19Q92543 992 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 SPAG5Q96R06 1193 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 NPY6RQ99463 290 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 PIGVQ9NUD9 493 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 HS3ST4Q9Y661 456 aa18.79■□□□□ 0.6
CD9-204ENST00000382519 EPHB6O15197 1021 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SIN3BO75182 1162 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SRPRAP08240 638 aaKnown RBP18.78■□□□□ 0.6
CD9-204ENST00000382519 CDK11BP21127 795 aaKnown RBP18.78■□□□□ 0.6
CD9-204ENST00000382519 SOX5P35711 763 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SCNN1AP37088 669 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 IRAK1P51617 712 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 NOMO3P69849 1222 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 ECT2LQ008S8 904 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 ZBTB16Q05516 673 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SYCP1Q15431 976 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SH3PXD2AQ5TCZ1 1133 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 HDDC3Q8N4P3 179 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 GANCQ8TET4 914 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 IGSF8Q969P0 613 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 RPL10LQ96L21 214 aaKnown RBP18.78■□□□□ 0.6
CD9-204ENST00000382519 TBCBQ99426 244 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 ADAM33Q9BZ11 813 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 SIK2Q9H0K1 926 aa18.78■□□□□ 0.6
CD9-204ENST00000382519 RSPH9Q9H1X1 276 aaPredicted RBP18.78■□□□□ 0.6
CD9-204ENST00000382519 NOCTQ9UK39 431 aaKnown RBP18.78■□□□□ 0.6
CD9-204ENST00000382519 CACNA1EQ15878 2313 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 LGALS16A8MUM7 142 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 METTL12A8MUP2 240 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 TTC34A8MYJ7 566 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 ARHGAP33O14559 1287 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 RNASEH1O60930 286 aaKnown RBP18.77■□□□□ 0.6
CD9-204ENST00000382519 SYPP08247 313 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 MZF1P28698 734 aaPredicted RBP18.77■□□□□ 0.6
CD9-204ENST00000382519 ACSL1P33121 698 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 STK19P49842 368 aaPredicted RBP18.77■□□□□ 0.6
CD9-204ENST00000382519 JAM2P57087 298 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 DEUP1Q05D60 604 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 SLC12A1Q13621 1099 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 BRMS1LQ5PSV4 323 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 ZNF677Q86XU0 584 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 MINDY1Q8N5J2 469 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 KDM1BQ8NB78 822 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 NEK11Q8NG66 645 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 OR2I1PQ8NGU4 316 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 DNASE2BQ8WZ79 361 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 BTBD1Q9H0C5 482 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 TKTL2Q9H0I9 626 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 C6orf106Q9H6K1 298 aaPredicted RBP18.77■□□□□ 0.6
CD9-204ENST00000382519 WDCPQ9H6R7 721 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 LIMA1Q9UHB6 759 aaKnown RBP18.77■□□□□ 0.6
CD9-204ENST00000382519 SLCO3A1Q9UIG8 710 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 SIK3Q9Y2K2 1263 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 DAAM1Q9Y4D1 1078 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 PAXBP1Q9Y5B6 917 aa18.77■□□□□ 0.6
CD9-204ENST00000382519 ITIH6Q6UXX5 1313 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.76■□□□□ 0.59
CD9-204ENST00000382519 EDDM13A0A1B0GTR0 161 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 A0A1B0GTW7 788 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 GIPC1O14908 333 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 OPHN1O60890 802 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 ADCY5O95622 1261 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 SEMA4FO95754 770 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 F9P00740 461 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 FLT3P36888 993 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 NNMTP40261 264 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 STAT1P42224 750 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 CXCR3P49682 368 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 OXCT1P55809 520 aa18.76■□□□□ 0.59
CD9-204ENST00000382519 CDR2Q01850 454 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms