RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SLC44A2Q8IWA5 706 aaPredicted RBP17.49■□□□□ 0.39
SGCB-201ENST00000381431 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 HSFY1Q96LI6 401 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 PCDHB8Q9UN66 801 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 PLA2G4CQ9UP65 541 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 NID2Q14112 1375 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 NFAT5O94916 1531 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 NPR3P17342 541 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 NFKB1P19838 968 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 NCALDP61601 193 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
SGCB-201ENST00000381431 CXCL17Q6UXB2 119 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 PPP2R3CQ969Q6 453 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 SCUBE2Q9NQ36 999 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 RRN3Q9NYV6 651 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 FAM50BQ9Y247 325 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 SCAMP3O14828 347 aaKnown RBP17.49■□□□□ 0.39
SGCB-201ENST00000381431 MAN1A2O60476 641 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
SGCB-201ENST00000381431 DNAJB2P25686 324 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 SERPINB10P48595 397 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 GPC2Q8N158 579 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 ZNF184Q99676 751 aaPredicted RBP17.49■□□□□ 0.39
SGCB-201ENST00000381431 TMEM79Q9BSE2 394 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 ACTR8Q9H981 624 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 CROTQ9UKG9 612 aa17.49■□□□□ 0.39
SGCB-201ENST00000381431 FAM95CA0A1B0GW59 222 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 KDM4FA0A1W2PPD8 638 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 NKRFO15226 690 aaKnown RBP eCLIP17.48■□□□□ 0.39
SGCB-201ENST00000381431 SOAT1P35610 550 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 PTDSS1P48651 473 aaKnown RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 PCYT1AP49585 367 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 FCGRTP55899 365 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 FAM171A1Q5VUB5 890 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 CMC1Q7Z7K0 106 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 ANKRD52Q8NB46 1076 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 COPS7BQ9H9Q2 264 aaPredicted RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 ZNF556Q9HAH1 456 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 C3P01024 1663 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 LRCH4O75427 683 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 TRPC1P48995 793 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 CDK7P50613 346 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 SLC1A5Q15758 541 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 AARS2Q5JTZ9 985 aaKnown RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 B3GALNT2Q8NCR0 500 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 OR6Y1Q8NGX8 325 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 SIX2Q9NPC8 291 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 IGKV6D-41A0A0C4DH26 115 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 ASTE1Q2TB18 679 aaPredicted RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 FBXO39Q8N4B4 442 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 DDX28Q9NUL7 540 aaKnown RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 RHBDL2Q9NX52 303 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 FARP2O94887 1054 aaPredicted RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 APOA1P02647 267 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 SLC22A9Q8IVM8 553 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 MYO1HQ8N1T3 1032 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 SPATA6LQ8N4H0 392 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 PPP1R10Q96QC0 940 aaKnown RBP17.48■□□□□ 0.39
SGCB-201ENST00000381431 ATP13A1Q9HD20 1204 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 ARHGAP28Q9P2N2 729 aa17.48■□□□□ 0.39
SGCB-201ENST00000381431 LYPLA1O75608 230 aaPredicted RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 ERBB2P04626 1255 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 ALDH2P05091 517 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 TSPAN8P19075 237 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 ITGALP20701 1170 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PREPLQ4J6C6 727 aaPredicted RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 LRRC8BQ6P9F7 803 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 GPR141Q7Z602 305 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 ALYREFQ86V81 257 aaKnown RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 ADAM2Q99965 735 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 TEX12Q9BXU0 123 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 DMAC2Q9NW81 257 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 SCN3BQ9NY72 215 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 WEE1P30291 646 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 GBE1Q04446 702 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 SLC39A12Q504Y0 691 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 ANKS6Q68DC2 871 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 C11orf96Q7Z7L8 435 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 SEMA6AQ9H2E6 1030 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 POMKQ9H5K3 350 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PCDH18Q9HCL0 1135 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 WRAP73Q9P2S5 460 aaPredicted RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PEAK1Q9H792 1746 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 PEX1O43933 1283 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 DEAF1O75398 565 aaPredicted RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 FAM155BO75949 473 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 CRABP2P29373 138 aa17.47■□□□□ 0.39
SGCB-201ENST00000381431 UBAP2LQ14157 1087 aaKnown RBP17.47■□□□□ 0.39
SGCB-201ENST00000381431 VAT1Q99536 393 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms