RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RRP8O43159 456 aaKnown RBP16.56■□□□□ 0.24
VCX3A-201ENST00000381089 GOT1P17174 413 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 C5AR1P21730 350 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 PSMD8P48556 350 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 NUCB2P80303 420 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 CETN1Q12798 172 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 CNGA2Q16280 664 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 C9orf64Q5T6V5 341 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 PMF1Q6P1K2 205 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 OR14C36Q8NHC7 312 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 PIP4K2CQ8TBX8 421 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 SAP25Q8TEE9 199 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 SERAC1Q96JX3 654 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 LMLNQ96KR4 655 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
VCX3A-201ENST00000381089 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 BBC3Q96PG8 261 aaPredicted RBP16.56■□□□□ 0.24
VCX3A-201ENST00000381089 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
VCX3A-201ENST00000381089 TJP2Q9UDY2 1190 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 PLXNA2O75051 1894 aa16.56■□□□□ 0.24
VCX3A-201ENST00000381089 MAGEC1O60732 1142 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 LUC7L3O95232 432 aaKnown RBP16.55■□□□□ 0.24
VCX3A-201ENST00000381089 APOEP02649 317 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 EPHA8P29322 1005 aaPredicted RBP16.55■□□□□ 0.24
VCX3A-201ENST00000381089 RPS24P62847 133 aaKnown RBP16.55■□□□□ 0.24
VCX3A-201ENST00000381089 LRRC63Q05C16 580 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 DNAJC3Q13217 504 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 ILKQ13418 452 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 MS4A13Q5J8X5 152 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 PRAMEF14Q5SWL7 426 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 NADSYN1Q6IA69 706 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 EID2Q8N6I1 236 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 UBR7Q8N806 425 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 BAP1Q92560 729 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 FAM149B1Q96BN6 582 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 MRGPRX3Q96LB0 322 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 MIS12Q9H081 205 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 ERVMER34-1Q9H9K5 563 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
VCX3A-201ENST00000381089 INTS6Q9UL03 887 aaKnown RBP16.55■□□□□ 0.24
VCX3A-201ENST00000381089 ASXL3Q9C0F0 2248 aa16.55■□□□□ 0.24
VCX3A-201ENST00000381089 ITIH6Q6UXX5 1313 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3DA0A087WVF3 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3IA0A087WXS9 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3EA0A087X179 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3KA0A087X1G2 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3FA6NER0 549 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TTC34A8MYJ7 566 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3LB9A6J9 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TLR4O00206 839 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 CAPN9O14815 690 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 MOCS2O96007 188 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 IL1BP01584 269 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 WNT1P04628 370 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3HP0C7X1 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 NUDT1P36639 197 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 PRCPP42785 496 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 ADPRHP54922 357 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 SEMG2Q02383 582 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 C19orf57Q0VDD7 668 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 ELAVL3Q14576 367 aaKnown RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 COBLL1Q53SF7 1204 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3GQ6DHY5 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3CQ6IPX1 549 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 PRPF39Q86UA1 669 aaKnown RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TBC1D3Q8IZP1 549 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 CLEC4CQ8WTT0 213 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 TFAP2BQ92481 460 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 FCRL2Q96LA5 508 aaPredicted RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 NRSN2Q9GZP1 204 aa16.54■□□□□ 0.24
VCX3A-201ENST00000381089 NUCKS1Q9H1E3 243 aaKnown RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 GCN1Q92616 2671 aaKnown RBP16.54■□□□□ 0.24
VCX3A-201ENST00000381089 A0A1W2PR77 199 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 TK2O00142 265 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 ACADSBP45954 432 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 FMO5P49326 533 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 ACADVLP49748 655 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 NXPH1P58417 271 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 SULT2A1Q06520 285 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 TARDBPQ13148 414 aaKnown RBP eCLIP16.53■□□□□ 0.24
VCX3A-201ENST00000381089 STIM1Q13586 685 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 SLC12A1Q13621 1099 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 DCAF6Q58WW2 860 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 FSCBQ5H9T9 825 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 HES3Q5TGS1 186 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 NAPEPLDQ6IQ20 393 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 DSG4Q86SJ6 1040 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 LGI2Q8N0V4 545 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 CFAP52Q8N1V2 620 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
VCX3A-201ENST00000381089 GSDMAQ96QA5 445 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms