RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 DTX3LQ8TDB6 740 aa12.22□□□□□ -0.45
TRIM23-203ENST00000381018 NTAN1Q96AB6 310 aa12.22□□□□□ -0.45
TRIM23-203ENST00000381018 COPG2Q9UBF2 871 aa12.22□□□□□ -0.45
TRIM23-203ENST00000381018 ANGPTL2Q9UKU9 493 aa12.22□□□□□ -0.45
TRIM23-203ENST00000381018 APOBEC2Q9Y235 224 aaKnown RBP12.22□□□□□ -0.45
TRIM23-203ENST00000381018 UNCXA6NJT0 531 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 KCNK1O00180 336 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 KLHL2O95198 593 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 AP2A1O95782 977 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 FAM163BP0C2L3 166 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ERCC2P18074 760 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 PTPN3P26045 913 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 LRPAP1P30533 357 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SERPINB8P50452 374 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 MAP3K7CLP57077 242 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 TPI1P60174 286 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ADAM17P78536 824 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SCAPQ12770 1279 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 HIC1Q14526 733 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SMAD1Q15797 465 aaKnown RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 CCDC153Q494R4 210 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 WSCD1Q658N2 575 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ANO7Q6IWH7 933 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 CES3Q6UWW8 571 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 C10orf107Q8IVU9 208 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ULK2Q8IYT8 1036 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ARRDC4Q8NCT1 418 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SMG8Q8ND04 991 aaKnown RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 SCG3Q8WXD2 468 aaKnown RBP12.21□□□□□ -0.45
TRIM23-203ENST00000381018 RBBP8Q99708 897 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 THTPAQ9BU02 230 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 KRT82Q9NSB4 513 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 DNAJC28Q9NX36 388 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
TRIM23-203ENST00000381018 FAM72CH0Y354 149 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 GABRDO14764 452 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 MTSS1O43312 755 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 PRKCGP05129 697 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 RALBP11234 206 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 SKIP12755 728 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 PSEN2P49810 448 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 CDK7P50613 346 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 LIMK2P53671 638 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 SEMA3BQ13214 749 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 FRG1Q14331 258 aaKnown RBP12.21□□□□□ -0.46
TRIM23-203ENST00000381018 PPM1JQ5JR12 505 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 RABGAP1LQ5R372 815 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 FAM72AQ5TYM5 149 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 FAM72DQ6L9T8 149 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 RIPOR1Q6ZS17 1223 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 FAM72BQ86X60 149 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 TP53INP2Q8IXH6 220 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 RNF169Q8NCN4 708 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 BRI3BPQ8WY22 251 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 ISL2Q96A47 359 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.46
TRIM23-203ENST00000381018 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.46
TRIM23-203ENST00000381018 AGAP3Q96P47 875 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 SORT1Q99523 831 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 BRD8Q9H0E9 1235 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 SNX15Q9NRS6 342 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 BFARQ9NZS9 450 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 VANGL2Q9ULK5 521 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 SOX13Q9UN79 622 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 LRCH1Q9Y2L9 728 aa12.21□□□□□ -0.46
TRIM23-203ENST00000381018 A6NHS1 94 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 ERI2A8K979 691 aaKnown RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 C9IYK1 514 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 PTGESO14684 152 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 NRP1O14786 923 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 TREHO43280 583 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 MAP3K7O43318 606 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 USP1O94782 785 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 FYNP06241 537 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 PDHA1P08559 390 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 MYL4P12829 197 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 CPA3P15088 417 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 ALOX15P16050 662 aaPredicted RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 PAX7P23759 505 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 MAGEA12P43365 314 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 HCAR3P49019 387 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 HARS2P49590 506 aaKnown RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 CRYBB1P53674 252 aaPredicted RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 GJA9P57773 515 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 DAOAP59103 153 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 KLC1Q07866 573 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 PPIDQ08752 370 aaKnown RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 OLIG2Q13516 323 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
TRIM23-203ENST00000381018 STRA8Q7Z7C7 330 aa12.2□□□□□ -0.46
TRIM23-203ENST00000381018 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms