RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PDCLQ13371 301 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 ARID5BQ14865 1188 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 TAF5Q15542 800 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 C9orf64Q5T6V5 341 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 TRIM65Q6PJ69 517 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 KDM1BQ8NB78 822 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 RHBDD1Q8TEB9 315 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 GANCQ8TET4 914 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 KIAA1522Q9P206 1035 aaPredicted RBP17.44■□□□□ 0.38
SMN2-201ENST00000380741 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 NCKAP1Q9Y2A7 1128 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 A0A1W2PP55 124 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 FAM47DPA6NHR8 397 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 BECN2A8MW95 431 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 KCNK3O14649 394 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 MID1O15344 667 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 RNASEH1O60930 286 aaKnown RBP17.43■□□□□ 0.38
SMN2-201ENST00000380741 MOCS3O95396 460 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
SMN2-201ENST00000380741 CAPNS1P04632 268 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 SRPRAP08240 638 aaKnown RBP17.43■□□□□ 0.38
SMN2-201ENST00000380741 ECT2LQ008S8 904 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 APBA1Q02410 837 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 CST6Q15828 149 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 KCNT1Q5JUK3 1230 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 KIAA0895LQ68EN5 471 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 MMAAQ8IVH4 418 aaKnown RBP17.43■□□□□ 0.38
SMN2-201ENST00000380741 APCDD1Q8J025 514 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 BTN2A3PQ96KV6 586 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 MED15Q96RN5 788 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 TOR4AQ9NXH8 423 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 SLCO3A1Q9UIG8 710 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 BTBD3Q9Y2F9 522 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 CEP83Q9Y592 693 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 ITIH6Q6UXX5 1313 aa17.43■□□□□ 0.38
SMN2-201ENST00000380741 EDDM13A0A1B0GTR0 161 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 TARSL2A2RTX5 802 aaKnown RBP17.42■□□□□ 0.38
SMN2-201ENST00000380741 F5H5T6 163 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 TAF4O00268 1085 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 RNASEH2AO75792 299 aaKnown RBP17.42■□□□□ 0.38
SMN2-201ENST00000380741 SLC9A1P19634 815 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 USP8P40818 1118 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 CTSKP43235 329 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 NUMBP49757 651 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 GALCP54803 685 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 SCAPQ12770 1279 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
SMN2-201ENST00000380741 ARHGAP44Q17R89 818 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 NCEH1Q6PIU2 408 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 ADAT2Q7Z6V5 191 aaKnown RBP17.42■□□□□ 0.38
SMN2-201ENST00000380741 CREBRFQ8IUR6 639 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 IGSF8Q969P0 613 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 RPL10LQ96L21 214 aaKnown RBP17.42■□□□□ 0.38
SMN2-201ENST00000380741 CDC6Q99741 560 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 NEUROG2Q9H2A3 272 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 FAM204AQ9H8W3 233 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 NBEAQ8NFP9 2946 aa17.42■□□□□ 0.38
SMN2-201ENST00000380741 KCNU1A8MYU2 1149 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 H0Y8X5 98 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 ATXN1LP0C7T5 689 aaKnown RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 PSMD8P48556 350 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 STK19P49842 368 aaPredicted RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 CCT8P50990 548 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 SFSWAPQ12872 951 aaKnown RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 SUZ12Q15022 739 aaKnown RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 RNF219Q5W0B1 726 aaPredicted RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 CCNI2Q6ZMN8 369 aaPredicted RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 CIR1Q86X95 450 aaPredicted RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 PROSER1Q86XN7 944 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 DEFB106AQ8N104 65 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 WDTC1Q8N5D0 677 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 FAM81BQ96LP2 452 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 SLC6A18Q96N87 628 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 CPXM1Q96SM3 734 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 FAM129BQ96TA1 746 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 PRMT1Q99873 361 aaKnown RBP17.41■□□□□ 0.38
SMN2-201ENST00000380741 OMDQ99983 421 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 EBF2Q9HAK2 575 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMN2-201ENST00000380741 APEX2Q9UBZ4 518 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 ADAMTS1Q9UHI8 967 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 RWDD2AQ9UIY3 292 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 FZD4Q9ULV1 537 aa17.41■□□□□ 0.38
SMN2-201ENST00000380741 CACNA1GO43497 2377 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 ITPR1Q14643 2758 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 SYNJ2BP-COX16A0A087WUM0 186 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 A0A1W2PPC4 97 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 DKK1O94907 266 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 PDGFRAP16234 1089 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 SLC8A1P32418 973 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 RACK1P63244 317 aaKnown RBP17.4■□□□□ 0.38
SMN2-201ENST00000380741 IL9RQ01113 521 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 GBP6Q6ZN66 633 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 PASD1Q8IV76 773 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 CCAR2Q8N163 923 aaKnown RBP17.4■□□□□ 0.38
SMN2-201ENST00000380741 STK40Q8N2I9 435 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 AADATQ8N5Z0 425 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms