RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 BACE2Q9Y5Z0 518 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MAD1L1Q9Y6D9 718 aa20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 MRPL42Q9Y6G3 142 aaKnown RBP20.37■□□□□ 0.85
PDLIM5-205ENST00000380180 ABHD14A-ACY1A0A1B0GW23 586 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC38A8A6NNN8 435 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 ZBTB24O43167 697 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 CPP00450 1065 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MLNP12872 115 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 NRG1Q02297 640 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 ZBTB17Q13105 803 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 TEX44Q53QW1 395 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 C10orf120Q5SQS8 335 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 FBXO46Q6PJ61 603 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 PRPF39Q86UA1 669 aaKnown RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MIB1Q86YT6 1006 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 DCAKDQ8WVC6 231 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 ZNF689Q96CS4 500 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 AGAP3Q96P47 875 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 PRMT1Q99873 361 aaKnown RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 C11orf49Q9H6J7 331 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 NDFIP2Q9NV92 336 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MAGED2Q9UNF1 606 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 DFFAO00273 331 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 CSF2RAP15509 400 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 DEFB103AP81534 67 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 LRRC8BQ6P9F7 803 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 ARHGAP12Q8IWW6 846 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 ZSCAN18Q8TBC5 510 aaPredicted RBP20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MGARPQ8TDB4 240 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 DPF3Q92784 378 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 GORASP1Q9BQQ3 440 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 TRABDQ9H4I3 376 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MPP6Q9NZW5 540 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 MARCH2Q9P0N8 246 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 TTLL3Q9Y4R7 772 aa20.36■□□□□ 0.85
PDLIM5-205ENST00000380180 A0A1W2PPM1 405 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 FAM107AO95990 144 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 CD68P34810 354 aaPredicted RBP20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 CCT5P48643 541 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 LRRC14Q15048 493 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 UNC5AQ6ZN44 842 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 ARHGAP36Q6ZRI8 547 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 LZTR1Q8N653 840 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 ANKRD42Q8N9B4 389 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 ANKLE1Q8NAG6 615 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 VAT1Q99536 393 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 TRIM56Q9BRZ2 755 aaKnown RBP20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 FAM107BQ9H098 131 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 KIF9Q9HAQ2 790 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 TRHDEQ9UKU6 1024 aa20.35■□□□□ 0.85
PDLIM5-205ENST00000380180 TRIM43BA6NCK2 446 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TRDMT1O14717 391 aaKnown RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TIMP1P01033 207 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 APOEP02649 317 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 C1QAP02745 245 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 ZDHHC11BP0C7U3 371 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 STX2P32856 288 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 COG7P83436 770 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 ZNF33AQ06730 810 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SPARCL1Q14515 664 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TRIP4Q15650 581 aaPredicted RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 ZNF473Q8WTR7 871 aaKnown RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TRIM43Q96BQ3 446 aaPredicted RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 ARMC5Q96C12 935 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC39A8Q9C0K1 460 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 CCSER2Q9H7U1 834 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 PIH1D1Q9NWS0 290 aaKnown RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 PCDH10Q9P2E7 1040 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 VANGL2Q9ULK5 521 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 PTPRSQ13332 1948 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 JCHAINP01591 159 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SOD2P04179 222 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 GSTA2P09210 222 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 CCNCP24863 283 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 IFNAR2P48551 515 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TUFMP49411 452 aaKnown RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 MS4A13Q5J8X5 152 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC44A1Q8WWI5 657 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TEKT5Q96M29 485 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 TSGA13Q96PP4 275 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 MLXIPLQ9NP71 852 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SENP1Q9P0U3 644 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 RSPH14Q9UHP6 348 aa20.34■□□□□ 0.85
PDLIM5-205ENST00000380180 SLC12A8A0AV02 714 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 SDR42E2A6NKP2 422 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 HMBSP08397 361 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 SESN2P58004 480 aaPredicted RBP20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 RTL3Q8N8U3 475 aaKnown RBP20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 ATP6V0D2Q8N8Y2 350 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 ZNF558Q96NG5 402 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 TTLL2Q9BWV7 592 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 GBA3Q9H227 469 aa20.33■□□□□ 0.85
PDLIM5-205ENST00000380180 KIAA1671Q9BY89 1806 aa20.33■□□□□ 0.84
PDLIM5-205ENST00000380180 SPAG7O75391 227 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 SEC24AO95486 1093 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 NFKB1P19838 968 aa20.32■□□□□ 0.84
PDLIM5-205ENST00000380180 PRKCHP24723 683 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms