RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 TKTL2Q9H0I9 626 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 UPF3AQ9H1J1 476 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 NOD2Q9HC29 1040 aa8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-204ENST00000380176 SDR42E2A6NKP2 422 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PPP1R12AO14974 1030 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 KIF1CO43896 1103 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 KRT38O76015 456 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 ALDH1A2O94788 518 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 NEFHP12036 1026 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 MLNP12872 115 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 RPL9P32969 192 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 GMPRP36959 345 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CCNFP41002 786 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PGFP49763 221 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 SCAPQ12770 1279 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 LPIN1Q14693 890 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CRYMQ14894 314 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PARP6Q2NL67 630 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 HACE1Q8IYU2 909 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 NDUFAF2Q8N183 169 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 OR52K1Q8NGK4 314 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 ADAM2Q99965 735 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 IQCGQ9H095 443 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 WDCPQ9H6R7 721 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CSNK1G1Q9HCP0 422 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.12e-9■■■■■ 149.3
PDLIM5-204ENST00000380176 CCDC195A0A1B0GUA6 201 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 ZBTB24O43167 697 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 B4GALT3O60512 393 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 DCTN3O75935 186 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 DLDP09622 509 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 ALDH3A1P30838 453 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CD68P34810 354 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 IRX4P78413 519 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CDK16Q00536 496 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PRKCZQ05513 592 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 ZBTB17Q13105 803 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 CTC1Q2NKJ3 1217 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 LGSNQ5TDP6 509 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM171BQ6P995 826 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 TAC4Q86UU9 113 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 SLC7A6OSQ96CW6 309 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PGAP3Q96FM1 320 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 FCRL3Q96P31 734 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 PKMYT1Q99640 499 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 C20orf27Q9GZN8 174 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 XPNPEP3Q9NQH7 507 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 EIF2B3Q9NR50 452 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 TRMT13Q9NUP7 481 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 KLHL8Q9P2G9 620 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 IGSF9Q9P2J2 1179 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 OR12D3Q9UGF7 316 aa8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 MAGED2Q9UNF1 606 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-204ENST00000380176 A0A0U1RQF3 1178 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 SEPT4O43236 478 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ZNF623O75123 536 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 STK10O94804 968 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 LRIG2O94898 1065 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ALDOAP04075 364 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 TROVE2P10155 538 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ERVK-10P10266 1014 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ODC1P11926 461 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 PCSK1P29120 753 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 SKIV2L2P42285 1042 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 CXCR3P49682 368 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 IFRD2Q12894 506 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 DSC3Q14574 896 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 CRTC2Q53ET0 693 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 MFSD14CQ5VZR4 134 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 C16orf46Q6P387 395 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 CLNKQ7Z7G1 428 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 STKLD1Q8NE28 680 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 TBC1D31Q96DN5 1066 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 CELF6Q96J87 481 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 TRIM55Q9BYV6 548 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 FBXO6Q9NRD1 293 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 HEY2Q9UBP5 337 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 COL4A4P53420 1690 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 PATJQ8NI35 1801 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM237BA0A1B0GVD1 139 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 CHUKO15111 745 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ELNP15502 786 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 PGAM1P18669 254 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 EPHB2P29323 1055 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 INHBEP58166 350 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 FOXK1P85037 733 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 PPIDQ08752 370 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 BST1Q10588 318 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 E2F5Q15329 346 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 HSF5Q4G112 596 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 PM20D1Q6GTS8 502 aa8.16□□□□□ -1.1
PDLIM5-204ENST00000380176 ZCCHC23Q6ZST2 131 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms