RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 NOP9Q86U38 636 aaKnown RBP25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 ZNF677Q86XU0 584 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 CCAR2Q8N163 923 aaKnown RBP25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 GANCQ8TET4 914 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 PPP1R9BQ96SB3 815 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 PRMT1Q99873 361 aaKnown RBP25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 GANQ9H2C0 597 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 NLRC4Q9NPP4 1024 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 FSCN3Q9NQT6 498 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 INTS6Q9UL03 887 aaKnown RBP25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 NCKAP1Q9Y2A7 1128 aa25.46■■□□□ 1.67
TNFRSF4-201ENST00000379236 GOLGA8SH3BPF8 625 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 MMEP08473 750 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 MAOBP27338 520 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 SCNN1AP37088 669 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 KLK7P49862 253 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 COPB1P53618 953 aaKnown RBP25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 RPS14P62263 151 aaKnown RBP25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 DEUP1Q05D60 604 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 SFSWAPQ12872 951 aaKnown RBP25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 CIR1Q86X95 450 aaPredicted RBP25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 KDM1BQ8NB78 822 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 NEK11Q8NG66 645 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 EPS8L1Q8TE68 723 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 SNX19Q92543 992 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 WDCPQ9H6R7 721 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 VANGL2Q9ULK5 521 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 NCOR2Q9Y618 2525 aa25.45■■□□□ 1.66
TNFRSF4-201ENST00000379236 F9P00740 461 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 PDGFRAP16234 1089 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 GABRB2P47870 512 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 HNRNPA1L2Q32P51 320 aaKnown RBP25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 BRMS1LQ5PSV4 323 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 NAA35Q5VZE5 725 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 FBXL22Q6P050 247 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 XYLT1Q86Y38 959 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 DHX40Q8IX18 779 aaKnown RBP25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 BTBD1Q9H0C5 482 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 SIK2Q9H0K1 926 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 CAPN10Q9HC96 672 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 TMEM51Q9NW97 253 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 SCML1Q9UN30 329 aa25.44■■□□□ 1.66
TNFRSF4-201ENST00000379236 ASCC3Q8N3C0 2202 aaKnown RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 ARHGAP33O14559 1287 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 OPHN1O60890 802 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SIN3BO75182 1162 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 PAGE1O75459 146 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SOX5P35711 763 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 STAT1P42224 750 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 CTSOP43234 321 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SULT2A1Q06520 285 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 ZNF177Q13360 481 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 AUHQ13825 339 aaKnown RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SH3PXD2AQ5TCZ1 1133 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 APCDD1Q8J025 514 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 ZCCHC9Q8N567 271 aaKnown RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 CPA5Q8WXQ8 436 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 MRGPRX3Q96LB0 322 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 NPY6RQ99463 290 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 NAT10Q9H0A0 1025 aaKnown RBP25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 TKTL2Q9H0I9 626 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 PCED1AQ9H1Q7 454 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SLC32A1Q9H598 525 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 PIGVQ9NUD9 493 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 SLC25A13Q9UJS0 675 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 HS3ST4Q9Y661 456 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 NUMA1Q14980 2115 aa25.43■■□□□ 1.66
TNFRSF4-201ENST00000379236 EDDM13A0A1B0GTR0 161 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 A0A1B0GTW7 788 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 TARSL2A2RTX5 802 aaKnown RBP25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 METTL12A8MUP2 240 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 NOMO3P69849 1222 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 CENPCQ03188 943 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 UBXN1Q04323 297 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 SYCP1Q15431 976 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 N4BP2L1Q5TBK1 243 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 MINDY1Q8N5J2 469 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 MYO19Q96H55 970 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 RPL10LQ96L21 214 aaKnown RBP25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 RSPH9Q9H1X1 276 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 MTG2Q9H4K7 406 aa25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 LIMA1Q9UHB6 759 aaKnown RBP25.42■■□□□ 1.66
TNFRSF4-201ENST00000379236 TTC34A8MYJ7 566 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 SEMA4FO95754 770 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 GGCXP38435 758 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 NUMBP49757 651 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 CDR2Q01850 454 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 SLC25A52Q3SY17 297 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 C2CD6Q53TS8 623 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 LRRC31Q6UY01 552 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 SLC20A1Q8WUM9 679 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 DNASE2BQ8WZ79 361 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 IGSF8Q969P0 613 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 TBCBQ99426 244 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 SGK2Q9HBY8 427 aa25.41■■□□□ 1.66
TNFRSF4-201ENST00000379236 ITIH6Q6UXX5 1313 aa25.4■■□□□ 1.66
TNFRSF4-201ENST00000379236 LGALS16A8MUM7 142 aa25.4■■□□□ 1.66
TNFRSF4-201ENST00000379236 CLDN11O75508 207 aa25.4■■□□□ 1.66
TNFRSF4-201ENST00000379236 ZNF18P17022 549 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms