RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 VDRP11473 427 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 LCP1P13796 627 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 BST2Q10589 180 aaKnown RBP14.26□□□□□ -0.13
PRPF18-202ENST00000378572 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 ZNF234Q14588 700 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 EIF4HQ15056 248 aaKnown RBP14.26□□□□□ -0.13
PRPF18-202ENST00000378572 STILQ15468 1287 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 FNDC3BQ53EP0 1204 aaKnown RBP14.26□□□□□ -0.13
PRPF18-202ENST00000378572 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 KIAA1328Q86T90 577 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 FAM124AQ86V42 546 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 TMPRSS6Q8IU80 811 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 ZNF276Q8N554 614 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 P2RY11Q96G91 374 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 UBXN6Q9BZV1 441 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 TSGA10Q9BZW7 698 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 ISCUQ9H1K1 167 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 ZMIZ1Q9ULJ6 1067 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
PRPF18-202ENST00000378572 KRT86O43790 486 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 RTN2O75298 545 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
PRPF18-202ENST00000378572 PRKCHP24723 683 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 KIF5AQ12840 1032 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 MPPE1Q53F39 396 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 RAB41Q5JT25 222 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 CPXM2Q8N436 756 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 ZCCHC14Q8WYQ9 949 aaKnown RBP14.25□□□□□ -0.13
PRPF18-202ENST00000378572 PCDHB18PQ96TA0 734 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 MKRN2Q9H000 416 aaKnown RBP14.25□□□□□ -0.13
PRPF18-202ENST00000378572 CD248Q9HCU0 757 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 FBXO10Q9UK96 956 aa14.25□□□□□ -0.13
PRPF18-202ENST00000378572 BTNL10A8MVZ5 291 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 PIK3R2O00459 728 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 MSI1O43347 362 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 TUBB4AP04350 444 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 UNGP13051 313 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 HLA-EP13747 358 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CDH5P33151 784 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 ARHGAP25P42331 645 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 RGS7P49802 495 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 GRIK2Q13002 908 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CLEC16AQ2KHT3 1053 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 NYAP1Q6ZVC0 841 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 PIP4P1Q86T03 277 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 ZNF419Q96HQ0 510 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 LHX5Q9H2C1 402 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 SEPT11Q9NVA2 429 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 RALYQ9UKM9 306 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CLEC4EQ9ULY5 219 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 PCDH15Q96QU1 1955 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 A0A1B0GTW7 788 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 BRD2P25440 801 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 OXTRP30559 389 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 TPMTP51580 245 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CENPCQ03188 943 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CNGA2Q16280 664 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 DCAF12L1Q5VU92 463 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 BSPRYQ5W0U4 402 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CYB5D2Q8WUJ1 264 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 TFAP2BQ92481 460 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 CAMK1GQ96NX5 476 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 PDCL3Q9H2J4 239 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 USP36Q9P275 1121 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 KLK13Q9UKR3 277 aa14.24□□□□□ -0.13
PRPF18-202ENST00000378572 HBS1LQ9Y450 684 aaKnown RBP14.24□□□□□ -0.13
PRPF18-202ENST00000378572 IGF2RP11717 2491 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 ANKRD62A6NC57 917 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 TMEM8BA6NDV4 472 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 RCCD1A6NED2 376 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 E7ENQ6 273 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 M0QYV0 167 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 O00370 1275 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 SH3BP5O60239 455 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 CALCAP01258 141 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 TMEM253P0C7T8 217 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 NOMO3P69849 1222 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 ACAD10Q6JQN1 1059 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 CHST9Q7L1S5 443 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 ZNF366Q8N895 744 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 LACRTQ9GZZ8 138 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 ABCB8Q9NUT2 735 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 DNAAF2Q9NVR5 837 aaKnown RBP14.23□□□□□ -0.13
PRPF18-202ENST00000378572 WSB2Q9NYS7 404 aaPredicted RBP14.23□□□□□ -0.13
PRPF18-202ENST00000378572 MYO1AQ9UBC5 1043 aa14.23□□□□□ -0.13
PRPF18-202ENST00000378572 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF18-202ENST00000378572 PLA2G4CQ9UP65 541 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms