RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 VIPAS39Q9H9C1 493 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 FBXO6Q9NRD1 293 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 TMEM30AQ9NV96 361 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SYBUQ9NX95 663 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GNEQ9Y223 722 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SCN1AP35498 2009 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 E9PBE3 544 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 KLHL41O60662 606 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 KRT38O76015 456 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 YWHAQP27348 245 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 MATKP42679 507 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 FKBP1BP68106 108 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CAP1Q01518 475 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PDK1Q15118 436 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SLC1A5Q15758 541 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 FAM219BQ5XKK7 198 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 C15orf39Q6ZRI6 1047 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 SRLQ86TD4 932 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 DDX53Q86TM3 631 aaKnown RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 IFNEQ86WN2 208 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 CASP10Q92851 521 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 ARHGEF4Q9NR80 690 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 DTLQ9NZJ0 730 aa8.31□□□□□ -1.08
CKAP2-203ENST00000378037 GREB1LQ9C091 1923 aaPredicted RBP8.31□□□□□ -1.08
CKAP2-203ENST00000378037 A0A1W2PQ67 120 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 MAPK13O15264 365 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 FKTNO75072 461 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 XPAP23025 273 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 SLC10A2Q12908 348 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ZNF470Q6ECI4 717 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 TRMT10CQ7L0Y3 403 aaKnown RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 SPATA21Q7Z572 469 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 LRRC37BQ96QE4 947 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 NUDCD1Q96RS6 583 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 FAM167BQ9BTA0 163 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 LRRC19Q9H756 370 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PCDH9Q9HC56 1237 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 IPO11Q9UI26 975 aaKnown RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 IGKV6-21A0A0C4DH24 114 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 MEFVO15553 781 aaPredicted RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 CNTN5O94779 1100 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ADRA1BP35368 520 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 WASP42768 502 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ACADSBP45954 432 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 STAT4Q14765 748 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 VEPH1Q14D04 833 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 RPS6KA2Q15349 733 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ZRANB3Q5FWF4 1079 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 KIAA0319Q5VV43 1072 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 BBS12Q6ZW61 710 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 MTDHQ86UE4 582 aaKnown RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 RASGEF1CQ8N431 466 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 LPCAT1Q8NF37 534 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 TTC1Q99614 292 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 MORF4L1Q9UBU8 362 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PCYOX1Q9UHG3 505 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 NME7Q9Y5B8 376 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PCDHGC4Q9Y5F7 938 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 KIAA1217Q5T5P2 1943 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 SETSIPP0DME0 302 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 KLRC2P26717 231 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 NOS2P35228 1153 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 HARS2P49590 506 aaKnown RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 USP46P62068 366 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 CYP4F8P98187 520 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 NAA25Q14CX7 972 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 VWA5B1Q5TIE3 1220 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 TXNDC8Q6A555 127 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 OLFML1Q6UWY5 402 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 TAS1R1Q7RTX1 841 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 CD248Q9HCU0 757 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 RUVBL2Q9Y230 463 aaKnown RBP8.3□□□□□ -1.08
CKAP2-203ENST00000378037 PCDHB5Q9Y5E4 795 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 GPR179Q6PRD1 2367 aa8.3□□□□□ -1.08
CKAP2-203ENST00000378037 TRIOO75962 3097 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 FAM237BA0A1B0GVD1 139 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 PABPN1LA6NDY0 278 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 SLC10A3P09131 477 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 INHBEP58166 350 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 MPP2Q14168 576 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 STILQ15468 1287 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 MAMDC4Q6UXC1 1216 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 TRIM67Q6ZTA4 783 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 DENND6AQ8IWF6 608 aa8.29□□□□□ -1.08
CKAP2-203ENST00000378037 DCP1BQ8IZD4 617 aaKnown RBP8.29□□□□□ -1.08
CKAP2-203ENST00000378037 ART4Q93070 314 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms