RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LMAN2Q12907 356 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 HADHQ16836 314 aaKnown RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ARTNQ5T4W7 220 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF513Q8N8E2 541 aaPredicted RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 TEKT4Q8WW24 435 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 TBC1D31Q96DN5 1066 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 BTBD6Q96KE9 485 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 OSGEPQ9NPF4 335 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 PCSK1NQ9UHG2 260 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CNTN5O94779 1100 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 LRIG2O94898 1065 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 RHOQP17081 205 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 POLR2EP19388 210 aaKnown RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 HOXC13P31276 330 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CXCL12P48061 93 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ALFQ53S48 1182 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 C2orf27AQ580R0 203 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 EOGTQ5NDL2 527 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CXorf57Q6NSI4 855 aaKnown RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 SYT13Q7L8C5 426 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 ADIPOR2Q86V24 386 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CIR1Q86X95 450 aaPredicted RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 PEBP4Q96S96 227 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 PRMT8Q9NR22 394 aaPredicted RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 DONSONQ9NYP3 566 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 FBXO4Q9UKT5 387 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 MMP17Q9ULZ9 603 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 BTNL10A8MVZ5 291 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 FAM72CH0Y354 149 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 NRDCO43847 1150 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 ASLP04424 464 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 TIE1P35590 1138 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 MAPKAPK2P49137 400 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 IRAK1P51617 712 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 FAM72AQ5TYM5 149 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 EMC10Q5UCC4 262 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 TMEM215Q68D42 235 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 SDE2Q6IQ49 451 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 FAM72DQ6L9T8 149 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 FAM72BQ86X60 149 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 IL17RCQ8NAC3 791 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 MPP6Q9NZW5 540 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 THAP10Q9P2Z0 257 aaPredicted RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 FGF10O15520 208 aaPredicted RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 PJA2O43164 708 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 OR1E1P30953 314 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 NTSR1P30989 418 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 SLC1A1P43005 524 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 HCAR3P49019 387 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 VAV2P52735 878 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 SLC25A11Q02978 314 aaKnown RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 SULT2A1Q06520 285 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 GSE1Q14687 1217 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 PITRM1Q5JRX3 1037 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 RWDD4Q6NW29 188 aaKnown RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 LRRC8AQ8IWT6 810 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 PYROXD2Q8N2H3 581 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 KDM1BQ8NB78 822 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 CIPCQ9C0C6 399 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 IRF2BPLQ9H1B7 796 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 DHX35Q9H5Z1 703 aaKnown RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 TMEM248Q9NWD8 314 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF212Q9UDV6 495 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 HCN2Q9UL51 889 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 PLA2G4CQ9UP65 541 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 SLC8A2Q9UPR5 921 aa13.62□□□□□ -0.23
CKAP2-202ENST00000378034 REXO2Q9Y3B8 237 aaKnown RBP13.62□□□□□ -0.23
CKAP2-202ENST00000378034 ILVBLA1L0T0 632 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 WASH4PA8MWX3 477 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
CKAP2-202ENST00000378034 RHOCP08134 193 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 DLDP09622 509 aaKnown RBP13.61□□□□□ -0.23
CKAP2-202ENST00000378034 IL1R2P27930 398 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 EPHB2P29323 1055 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 HOXA6P31267 233 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 CSKP41240 450 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 NOP2P46087 812 aaKnown RBP13.61□□□□□ -0.23
CKAP2-202ENST00000378034 ENPP2Q13822 863 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 MESDQ14696 234 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 DPYSL2Q16555 572 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF528Q3MIS6 628 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 FUT11Q495W5 492 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 EGFLAMQ63HQ2 1017 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 PKN3Q6P5Z2 889 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms