RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 INPPL1O15357 1258 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 PRPF4O43172 522 aaKnown RBP eCLIP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 MGEA5O60502 916 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 VAPBO95292 243 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 APODP05090 189 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 ITGB1P05556 798 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CFHP08603 1231 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 NCF1P14598 390 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 DAOAP59103 153 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CRADDP78560 199 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 LAMB3Q13751 1172 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 BOP1Q14137 746 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 ACAP1Q15027 740 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CCNG2Q16589 344 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 SYPL2Q5VXT5 272 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 XYLT1Q86Y38 959 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 USP6NLQ92738 828 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 FUBP3Q96I24 572 aaKnown RBP eCLIP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 LHX5Q9H2C1 402 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 BPIFA1Q9NP55 256 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 MED4Q9NPJ6 270 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CD274Q9NZQ7 290 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 WNT6Q9Y6F9 365 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 IGKV6-21A0A0C4DH24 114 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 A0A0G2JND7 137 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 ZSCAN5CA6NGD5 496 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 PPP1R37O75864 691 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 UGT2B4P06133 528 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CCNB1P14635 433 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 ETS1P14921 441 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 NR1D1P20393 614 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 SPRP35270 261 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 POLR2LP62875 67 aaKnown RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 GRM2Q14416 872 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 MARCH8Q5T0T0 291 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 SYDE1Q6ZW31 735 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 NUDCD3Q8IVD9 361 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 FAM126BQ8IXS8 530 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 ANKLE1Q8NAG6 615 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 FBXO36Q8NEA4 188 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 RNF157Q96PX1 679 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 SPATA16Q9BXB7 569 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 FAM153AQ9UHL3 310 aa8.66□□□□□ -1.02
CRNKL1-202ENST00000377340 MBLAC1A4D2B0 266 aaPredicted RBP8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TMEM191CA6NGB0 347 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 NBNO60934 754 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 FNTAP49354 379 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 KCNQ1P51787 676 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 WDR5P61964 334 aaKnown RBP8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 GPR17Q13304 367 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 SLC29A2Q14542 456 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TEAD2Q15562 447 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 SETMARQ53H47 684 aaPredicted RBP8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 C11orf96Q7Z7L8 435 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 DDIASQ8IXT1 998 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 CPA6Q8N4T0 437 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 FBXL18Q96ME1 805 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 PPP1R2P1Q96PQ5 205 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TMEM175Q9BSA9 504 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 DRC3Q9H069 523 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 DCTN4Q9UJW0 460 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 INSL5Q9Y5Q6 135 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 MYH11P35749 1972 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 MTMR11A4FU01 709 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 DAB1O75553 588 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 RNASEH2AO75792 299 aaKnown RBP8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 DNTTP04053 509 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 CTSEP14091 401 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TACR2P21452 398 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 ABCG1P45844 678 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 GLRBP48167 497 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 PFKPQ01813 784 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 FAAP100Q0VG06 881 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 KIF19Q2TAC6 998 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 GLT6D1Q7Z4J2 308 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 TRAPPC5Q8IUR0 188 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 ABCG8Q9H221 673 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 STK39Q9UEW8 545 aa8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 AJAP1Q9UKB5 411 aaPredicted RBP8.65□□□□□ -1.02
CRNKL1-202ENST00000377340 APOC4-APOC2K7ER74 178 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 FGF10O15520 208 aaPredicted RBP8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 ACSL4O60488 711 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 TADA3O75528 432 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 LRIG2O94898 1065 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 GJB5O95377 273 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 APOC2P02655 101 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 PSMB4P28070 264 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 PTK6Q13882 451 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 E2F5Q15329 346 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 MPPE1Q53F39 396 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 GRAMD4Q6IC98 578 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 LRRC6Q86X45 466 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 TRIM42Q8IWZ5 723 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms