RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 FCRL2Q96LA5 508 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 TOX2Q96NM4 488 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SEPT5Q99719 369 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 OXCT2Q9BYC2 517 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 CATSPERBQ9H7T0 1116 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SSU72Q9NP77 194 aaKnown RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SLC27A5Q9Y2P5 690 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 TRDMT1O14717 391 aaKnown RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 HAPLN1P10915 354 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 COG7P83436 770 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 PRSS55Q6UWB4 352 aaPredicted RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 TAS1R1Q7RTX1 841 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 C2orf15Q8WU43 125 aaKnown RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 DPF3Q92784 378 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SLC39A13Q96H72 371 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 SPATA17Q96L03 361 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 TRIM56Q9BRZ2 755 aaKnown RBP17.24■□□□□ 0.35
HLA-A-202ENST00000376806 GBA3Q9H227 469 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 HS3ST4Q9Y661 456 aa17.24■□□□□ 0.35
HLA-A-202ENST00000376806 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 TYROBPO43914 113 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
HLA-A-202ENST00000376806 TBX4P57082 545 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 ZNF33AQ06730 810 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 GKAP1Q5VSY0 366 aaPredicted RBP17.23■□□□□ 0.35
HLA-A-202ENST00000376806 STEAP4Q687X5 459 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 ITPRIPL1Q6GPH6 555 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■■■□ 20
HLA-A-202ENST00000376806 SLC26A11Q86WA9 606 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 ARHGAP12Q8IWW6 846 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 VAT1Q99536 393 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 NSRP1Q9H0G5 558 aaKnown RBP17.23■□□□□ 0.35
HLA-A-202ENST00000376806 CLIC5Q9NZA1 410 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 GGA2Q9UJY4 613 aa17.23■□□□□ 0.35
HLA-A-202ENST00000376806 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 E9PAM4 449 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ZBTB24O43167 697 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 UPP2O95045 317 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SLC2A3P11169 496 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 KRT4P19013 534 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CA4P22748 312 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 MGAT1P26572 445 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CD68P34810 354 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 PIK3R6Q5UE93 754 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 MICALCLQ6ZW33 695 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CTAGE3PQ8IX95 158 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ATPAF2Q8N5M1 289 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 LZTR1Q8N653 840 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 PPM1NQ8N819 430 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SEC16BQ96JE7 1060 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 MAGEB18Q96M61 343 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SMYD2Q9NRG4 433 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ATXN2Q99700 1313 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 KIAA1671Q9BY89 1806 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SDR42E2A6NKP2 422 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 FAM159BA6NKW6 160 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CXorf49A8MYA2 514 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TCP11X1B4DZS4 312 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 DFFAO00273 331 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ASMTLO95671 621 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 AP2A1O95782 977 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 EFEMP2O95967 443 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 NFKB1P19838 968 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 PSEN1P49768 467 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SESN2P58004 480 aaPredicted RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 EFEMP1Q12805 493 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TAF10Q12962 218 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TEX44Q53QW1 395 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CNKSR3Q6P9H4 555 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TRMT10BQ6PF06 316 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 C14orf80Q86SX3 495 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 SRLQ86TD4 932 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CACNA2D3Q8IZS8 1091 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 AGAP3Q96P47 875 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 C11orf49Q9H6J7 331 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 TLR8Q9NR97 1041 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 OLA1Q9NTK5 396 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 ZNF180Q9UJW8 692 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 RRP15Q9Y3B9 282 aaKnown RBP17.22■□□□□ 0.35
HLA-A-202ENST00000376806 CDY1Q9Y6F8 540 aa17.22■□□□□ 0.35
HLA-A-202ENST00000376806 MYLKQ15746 1914 aa17.21■□□□□ 0.35
HLA-A-202ENST00000376806 SUN1O94901 812 aa17.21■□□□□ 0.35
HLA-A-202ENST00000376806 CSH1P0DML2 217 aa17.21■□□□□ 0.35
HLA-A-202ENST00000376806 CSH2P0DML3 217 aa17.21■□□□□ 0.35
HLA-A-202ENST00000376806 RPA3P35244 121 aaPredicted RBP17.21■□□□□ 0.35
HLA-A-202ENST00000376806 TUBP50607 506 aa17.21■□□□□ 0.35
HLA-A-202ENST00000376806 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms