RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLC2A3P11169 496 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 CTSOP43234 321 aaPredicted RBP21.74■■□□□ 1.07
VSX1-201ENST00000376707 ECT2LQ008S8 904 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 PTK2Q05397 1052 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 ARID5BQ14865 1188 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 EFHC1Q5JVL4 640 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 DEFB106AQ8N104 65 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 CHCHD4Q8N4Q1 142 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 WDTC1Q8N5D0 677 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 KDF1Q8NAX2 398 aaPredicted RBP21.74■■□□□ 1.07
VSX1-201ENST00000376707 NUP62CLQ9H1M0 184 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 TM9SF3Q9HD45 589 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 OSGEPQ9NPF4 335 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 FBXL12Q9NXK8 326 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 COX16Q9P0S2 106 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 PCDHGC3Q9UN70 934 aa21.74■■□□□ 1.07
VSX1-201ENST00000376707 EDDM13A0A1B0GTR0 161 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 TARSL2A2RTX5 802 aaKnown RBP21.73■■□□□ 1.07
VSX1-201ENST00000376707 FAM47DPA6NHR8 397 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 TTC34A8MYJ7 566 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 HSF2BPO75031 334 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 CD27P26842 260 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 CCR1P32246 355 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 CST6Q15828 149 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 MAN2A1Q16706 1144 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 RABGAP1LQ5R372 815 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 C9orf64Q5T6V5 341 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 FAM114A1Q8IWE2 563 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 APCDD1Q8J025 514 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 SLC2A13Q96QE2 648 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 ASNSD1Q9NWL6 643 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 DACH1Q9UI36 760 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 DNAJC12Q9UKB3 198 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 PCOLCE2Q9UKZ9 415 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 PCNX2A6NKB5 2137 aa21.73■■□□□ 1.07
VSX1-201ENST00000376707 MID1O15344 667 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 GRAP2O75791 330 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 FTH1P19P0C7X4 201 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 KRT9P35527 623 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 NNMTP40261 264 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 GRIA4P48058 902 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 SNX16P57768 344 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 EIF4EBP2Q13542 120 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 SLC12A1Q13621 1099 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 KIF19Q2TAC6 998 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 CT47A1Q5JQC4 288 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 TTC39BQ5VTQ0 682 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 KIAA0895LQ68EN5 471 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 OR6B2Q6IFH4 312 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 C11orf57Q6ZUT1 292 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 RAB44Q7Z6P3 723 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 CIR1Q86X95 450 aaPredicted RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 MMAAQ8IVH4 418 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 CCAR2Q8N163 923 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 C1orf131Q8NDD1 294 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 RPL10LQ96L21 214 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 PRMT1Q99873 361 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 OMDQ99983 421 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 SYNCQ9H7C4 482 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 SIX2Q9NPC8 291 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 LMBRD1Q9NUN5 540 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 SLCO3A1Q9UIG8 710 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 APOBEC2Q9Y235 224 aaKnown RBP21.72■■□□□ 1.07
VSX1-201ENST00000376707 ANKRD6Q9Y2G4 727 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 SNX11Q9Y5W9 270 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 FRYQ5TBA9 3013 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 ITIH6Q6UXX5 1313 aa21.72■■□□□ 1.07
VSX1-201ENST00000376707 A0A1B0GVM2 712 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 A0A1W2PP55 124 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 TCAF2A6NFQ2 919 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 CBFA2T3O75081 653 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 RNASEH2AO75792 299 aaKnown RBP21.71■■□□□ 1.07
VSX1-201ENST00000376707 SUZ12Q15022 739 aaKnown RBP21.71■■□□□ 1.07
VSX1-201ENST00000376707 FAM183BPQ6ZVS7 135 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 ADAT2Q7Z6V5 191 aaKnown RBP21.71■■□□□ 1.07
VSX1-201ENST00000376707 ZCCHC14Q8WYQ9 949 aaKnown RBP21.71■■□□□ 1.07
VSX1-201ENST00000376707 NDST4Q9H3R1 872 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 SERGEFQ9UGK8 458 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 AJAP1Q9UKB5 411 aaPredicted RBP21.71■■□□□ 1.07
VSX1-201ENST00000376707 PCDHGB2Q9Y5G2 931 aa21.71■■□□□ 1.07
VSX1-201ENST00000376707 FOXN3O00409 490 aaPredicted RBP21.7■■□□□ 1.06
VSX1-201ENST00000376707 FLRT2O43155 660 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 ERBB2P04626 1255 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 IGHV4-34P06331 123 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 PRKCSHP14314 528 aaPredicted RBP21.7■■□□□ 1.06
VSX1-201ENST00000376707 PDGFRAP16234 1089 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 SLC8A1P32418 973 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 PSMD8P48556 350 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 NUMBP49757 651 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 STK19P49842 368 aaPredicted RBP21.7■■□□□ 1.06
VSX1-201ENST00000376707 GALCP54803 685 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 OXCT1P55809 520 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 SULT2A1Q06520 285 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 NME3Q13232 169 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 MTA1Q13330 715 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 VWA3BQ502W6 1294 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 MIIPQ5JXC2 388 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 LRSAM1Q6UWE0 723 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 LAYNQ6UX15 382 aa21.7■■□□□ 1.06
VSX1-201ENST00000376707 GLRX5Q86SX6 157 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms