RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PCYT2Q99447 389 aa16.9■□□□□ 0.3
TRIM39-201ENST00000376656 RNF11Q9Y3C5 154 aa16.9■□□□□ 0.3
TRIM39-201ENST00000376656 ATP6V1G1O75348 118 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 RNASEH2AO75792 299 aaKnown RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 ITGB3P05106 788 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 PTPN1P18031 435 aaKnown RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 CCR10P46092 362 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 IRF9Q00978 393 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 EEF1DP3Q658K8 133 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 KLHL35Q6PF15 583 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM102Q8N9M5 508 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 FAM156AQ8NDB6 213 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 QKIQ96PU8 341 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 GMLQ99445 158 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 SYBUQ9NX95 663 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 LTFP02788 710 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 HNRNPCP07910 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 PGAM1P18669 254 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 TCN1P20061 433 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 ABCG1P45844 678 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 EFNA5P52803 228 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 ATXN1P54253 815 aaKnown RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 NRF1Q16656 503 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 LSM12Q3MHD2 195 aaKnown RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 CCDC153Q494R4 210 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 TRIM67Q6ZTA4 783 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 RIN3Q8TB24 985 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 GRIN3AQ8TCU5 1115 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 SLC4A5Q9BY07 1137 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 CEP41Q9BYV8 373 aa16.89■□□□□ 0.29
TRIM39-201ENST00000376656 GBA2Q9HCG7 927 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-201ENST00000376656 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 B4GALT5O43286 388 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CCDC130P13994 396 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CLCN2P51788 898 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 GTF2A2P52657 109 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 LPIN1Q14693 890 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 DLG2Q15700 870 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 TSPAN14Q8NG11 270 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 DHX35Q9H5Z1 703 aaKnown RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 RSL24D1Q9UHA3 163 aaKnown RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 TSPAN16Q9UKR8 245 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 COL11A1P12107 1806 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 C7orf72A4D263 438 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 PFKMP08237 780 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 VDRP11473 427 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 P4HA1P13674 534 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 PSMC3P17980 439 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 GP5P40197 560 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 HSPA13P48723 471 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 LRRC71Q8N4P6 559 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 RP9Q8TA86 221 aaKnown RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 PDCD6IPQ8WUM4 868 aaKnown RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 MARK4Q96L34 752 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CCT7Q99832 543 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 GATA5Q9BWX5 397 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 WDR41Q9HAD4 459 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 THEGQ9P2T0 379 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 FER1L6Q2WGJ9 1857 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CAPNS1P04632 268 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 ZNF26P17031 533 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 ME2P23368 584 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 SDC4P31431 198 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 LRRC8BQ6P9F7 803 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CHERPQ8IWX8 916 aaKnown RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 C12orf29Q8N999 325 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 COLGALT1Q8NBJ5 622 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CNDP1Q96KN2 507 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 INO80BQ9C086 356 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 SUDS3Q9H7L9 328 aaPredicted RBP16.88■□□□□ 0.29
TRIM39-201ENST00000376656 CAB39LQ9H9S4 337 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 VPS28Q9UK41 221 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 HES2Q9Y543 173 aa16.88■□□□□ 0.29
TRIM39-201ENST00000376656 MDM4O15151 490 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 LAMTOR4Q0VGL1 99 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 MPZL3Q6UWV2 235 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 TRIML2Q8N7C3 387 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 ZSCAN18Q8TBC5 510 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-201ENST00000376656 KHSRPQ92945 711 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM39-201ENST00000376656 LGMNQ99538 433 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 SEMA6AQ9H2E6 1030 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 DTLQ9NZJ0 730 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
TRIM39-201ENST00000376656 MAFO75444 373 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-201ENST00000376656 BCAS2O75934 225 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-201ENST00000376656 MLNP12872 115 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 OLIG2Q13516 323 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 MGAT5BQ3V5L5 792 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 OLFML1Q6UWY5 402 aa16.87■□□□□ 0.29
TRIM39-201ENST00000376656 PGAM4Q8N0Y7 254 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms