RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 RXFP3Q9NSD7 469 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 DTNAQ9Y4J8 743 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 LOC105369274A0A096LPK9 316 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 LOC102723532A0A0G2JNH3 316 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 KIF28PB7ZC32 967 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 RASA4BC9J798 803 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 RASA4O43374 803 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 RPP40O75818 363 aaKnown RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 FGF18O76093 207 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 SETSIPP0DME0 302 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 AKT1P31749 480 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 TAS2R50P59544 299 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 ZXDBP98169 803 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 CBFBQ13951 182 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 CSHL1Q14406 222 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 AAK1Q2M2I8 961 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 GLE1Q53GS7 698 aaKnown RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 SLC39A5Q6ZMH5 540 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 DPP9Q86TI2 863 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 OR4N4Q8N0Y3 316 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 FBXL14Q8N1E6 418 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 OR2C3Q8N628 320 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 CLEC4CQ8WTT0 213 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 LMLNQ96KR4 655 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 ADAD1Q96M93 576 aaKnown RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 WDR83Q9BRX9 315 aaKnown RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 MECRQ9BV79 373 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 PTPRHQ9HD43 1115 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 IGSF9Q9P2J2 1179 aa2.49□□□□□ -2.01
VPS13A-206ENST00000376646 TRPC5Q9UL62 973 aaPredicted RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 UBE2J1Q9Y385 318 aaPredicted RBP2.49□□□□□ -2.01
VPS13A-206ENST00000376646 GXYLT2A0PJZ3 443 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 BECN2A8MW95 431 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 PIP5K1BO14986 540 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 EIF3JO75822 258 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ACAA1P09110 424 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 RFX5P48382 616 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TRAPPC10P48553 1259 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 HSPA7P48741 367 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 FOXL2P58012 376 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 CHAF1AQ13111 956 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 RAB30Q15771 203 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 MPEG1Q2M385 716 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 WASHC2DQ5SRD0 308 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TRILQ7L0X0 811 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ENAHQ8N8S7 591 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 LPAR1Q92633 364 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ZNF304Q9HCX3 659 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 KCNK9Q9NPC2 374 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 SIRT3Q9NTG7 399 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TCF20Q9UGU0 1960 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 A0A1B0GVT2 93 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ABHD14A-ACY1A0A1B0GW23 586 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 FOXO6A8MYZ6 492 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 IFRD1O00458 451 aaPredicted RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ANXA6P08133 673 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ABCB4P21439 1286 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TGM2P21980 687 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TMPRSS3P57727 454 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 RPL15P61313 204 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 RNASELQ05823 741 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 TRAF1Q13077 416 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ENTPD8Q5MY95 495 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 FAM83BQ5T0W9 1011 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 WDR93Q6P2C0 686 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 Q6ZTK2 550 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 CYB5R4Q7L1T6 521 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 MDGA2Q7Z553 956 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 FAM47BQ8NA70 645 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 C7orf57Q8NEG2 295 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 DEPTORQ8TB45 409 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 POLDIP3Q9BY77 421 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ARHGAP39Q9C0H5 1083 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 CERS4Q9HA82 394 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 PPCSQ9HAB8 311 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 SEPSECSQ9HD40 501 aaKnown RBP2.48□□□□□ -2.01
VPS13A-206ENST00000376646 ERVK-5Q9HDB9 667 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 CDC23Q9UJX2 597 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 SLC12A4Q9UP95 1085 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 CEP83Q9Y592 693 aa2.48□□□□□ -2.01
VPS13A-206ENST00000376646 RPS10-NUDT3A0A1W2PQS6 291 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 AQP12BA6NM10 295 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 IFITM10A6NMD0 228 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 F5H423 210 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 NKX2-8O15522 239 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 NEURL1O76050 574 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 SGPL1O95470 568 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PGGT1BP53609 377 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PMPCAQ10713 525 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 GRAMD1BQ3KR37 738 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 INO80DQ53TQ3 878 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 IZUMO3Q5VZ72 239 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ZNF324BQ6AW86 544 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 ISM2Q6H9L7 571 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 KIAA1324Q6UXG2 1013 aaKnown RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 DLK2Q6UY11 383 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 RTL10Q7L3V2 364 aa2.47□□□□□ -2.01
VPS13A-206ENST00000376646 DCP1BQ8IZD4 617 aaKnown RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 PAQR4Q8N4S7 273 aaPredicted RBP2.47□□□□□ -2.01
VPS13A-206ENST00000376646 SRFBP1Q8NEF9 429 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms