RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TACR2P21452 398 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 C5AR1P21730 350 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 STX17P56962 302 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 ELAVL3Q14576 367 aaKnown RBP15.25■□□□□ 0.03
HDAC6-204ENST00000376643 KIF19Q2TAC6 998 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 DCAF6Q58WW2 860 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 ACBD5Q5T8D3 534 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-204ENST00000376643 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC6-204ENST00000376643 WFDC5Q8TCV5 224 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 RNF34Q969K3 372 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 LMLNQ96KR4 655 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 FAM204AQ9H8W3 233 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 APEX2Q9UBZ4 518 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 RWDD2AQ9UIY3 292 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 FAM208BQ5VWN6 2430 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 MUC22E2RYF6 1773 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 A0A1W2PPC4 97 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 KCNU1A8MYU2 1149 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 E5RJQ4 531 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 BIN1O00499 593 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 VILLO15195 856 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 PAPSS1O43252 624 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 TNFSF14O43557 240 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 MAGEC1O60732 1142 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 SIN3BO75182 1162 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 BMP6P22004 513 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 CCR5P51681 352 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 PTK2Q05397 1052 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 PDCLQ13371 301 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 FAM46CQ5VWP2 391 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 DENND1BQ6P3S1 775 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 DHX40Q8IX18 779 aaKnown RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 OXR1Q8N573 874 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 BAHD1Q8TBE0 780 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 CCDC86Q9H6F5 360 aaKnown RBP15.24■□□□□ 0.03
HDAC6-204ENST00000376643 IL21RQ9HBE5 538 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 RRN3Q9NYV6 651 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 SNX11Q9Y5W9 270 aa15.24■□□□□ 0.03
HDAC6-204ENST00000376643 A0A1W2PP55 124 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 FAM47DPA6NHR8 397 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 SLC7A4O43246 635 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 RNASEH2AO75792 299 aaKnown RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 IGLV3-25P01717 112 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 GOT1P17174 413 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 SLC8A1P32418 973 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 USP8P40818 1118 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 VASPP50552 380 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 PLK1P53350 603 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 BPIFB4P59827 614 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 TPD52L1Q16890 204 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 EXOC3L4Q17RC7 722 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 ZC3H12AQ5D1E8 599 aaKnown RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 C9orf64Q5T6V5 341 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 RAP1GAP2Q684P5 730 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 PROSER1Q86XN7 944 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 ZDHHC17Q8IUH5 632 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 MMAAQ8IVH4 418 aaKnown RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 ADAM32Q8TC27 787 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 MYO19Q96H55 970 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 MRGPRX3Q96LB0 322 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 KDM4CQ9H3R0 1056 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 SYNCQ9H7C4 482 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 DDIT4Q9NX09 232 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 SLC25A13Q9UJS0 675 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 INTS6Q9UL03 887 aaKnown RBP15.23■□□□□ 0.03
HDAC6-204ENST00000376643 PCDHGC3Q9UN70 934 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 IGF2RP11717 2491 aa15.23■□□□□ 0.03
HDAC6-204ENST00000376643 E9PAM4 449 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 C1QTNF3-AMACRE9PGA6 284 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 ALOX15BO15296 676 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 MID1O15344 667 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 KRT9P35527 623 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 CTSKP43235 329 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 ARRB1P49407 418 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-204ENST00000376643 GALCP54803 685 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 BNC1Q01954 994 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 SYPL2Q5VXT5 272 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 NCEH1Q6PIU2 408 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 C11orf57Q6ZUT1 292 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-204ENST00000376643 TMPRSS7Q7RTY8 843 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 PPP1R13BQ96KQ4 1090 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 SLC2A13Q96QE2 648 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 AASDHPPTQ9NRN7 309 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 KIAA1468Q9P260 1216 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 FTSJ1Q9UET6 329 aa15.22■□□□□ 0.03
HDAC6-204ENST00000376643 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-204ENST00000376643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms