RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 VCPP55072 806 aaKnown RBP23.57■■□□□ 1.36
HLA-C-202ENST00000376237 PTCRAQ6ISU1 281 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-202ENST00000376237 TPGS1Q6ZTW0 290 aa23.57■■□□□ 1.36
HLA-C-202ENST00000376237 ZNF557Q8N988 423 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-202ENST00000376237 ATP2A3Q93084 1043 aa23.57■■□□□ 1.36
HLA-C-202ENST00000376237 FAM83CQ9BQN1 747 aa23.57■■□□□ 1.36
HLA-C-202ENST00000376237 SMARCAL1Q9NZC9 954 aa23.57■■□□□ 1.36
HLA-C-202ENST00000376237 MARK1Q9P0L2 795 aa23.57■■□□□ 1.36
HLA-C-202ENST00000376237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-202ENST00000376237 CCDC188H7C350 402 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 NCAM2O15394 837 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 NFATC1O95644 943 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 OR1E1P30953 314 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 IRAK1P51617 712 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 NDST2P52849 883 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 ZNF177Q13360 481 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-202ENST00000376237 HTR4Q13639 388 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 SIX1Q15475 284 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-202ENST00000376237 CCNG2Q16589 344 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 EML3Q32P44 896 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 SETD3Q86TU7 594 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-202ENST00000376237 CCDC117Q8IWD4 279 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-202ENST00000376237 ZDHHC14Q8IZN3 488 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 UMODL1-AS1Q8N2C9 162 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 SPATA4Q8NEY3 305 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 ZNF212Q9UDV6 495 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 HEY1Q9Y5J3 304 aa23.56■■□□□ 1.36
HLA-C-202ENST00000376237 DOCK8Q8NF50 2099 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 C2CD4DB7Z1M9 353 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 CHADO15335 359 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 SGSHP51688 502 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 YBEYP58557 167 aaPredicted RBP23.55■■□□□ 1.36
HLA-C-202ENST00000376237 C6orf118Q5T5N4 469 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 RNF43Q68DV7 783 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 C1orf228Q6PIY5 440 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 TFAP2DQ7Z6R9 452 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 TMEM25Q86YD3 366 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 ACTL9Q8TC94 416 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 KXD1Q9BQD3 176 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 TRMT61BQ9BVS5 477 aaKnown RBP23.55■■□□□ 1.36
HLA-C-202ENST00000376237 AP1M1Q9BXS5 423 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 DTLQ9NZJ0 730 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 TBC1D30Q9Y2I9 924 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 NUMBLQ9Y6R0 609 aa23.55■■□□□ 1.36
HLA-C-202ENST00000376237 SLC34A2O95436 690 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 ADH1CP00326 375 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 PENKP01210 267 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 MX2P20592 715 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 OXCT1P55809 520 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 OTUD4Q01804 1114 aaKnown RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 GBE1Q04446 702 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 NOMO1Q15155 1222 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CYP1B1Q16678 543 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 LY6G5CQ5SRR4 150 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 FYB2Q5VWT5 728 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 RHBDF2Q6PJF5 856 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CIR1Q86X95 450 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 LRRC49Q8IUZ0 686 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 PRELID2Q8N945 189 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 PLA2G2FQ9BZM2 168 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 KLC2Q9H0B6 622 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CTAGE15A4D2H0 777 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 H0Y626 953 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 LUC7L3O95232 432 aaKnown RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CTAGE8P0CG41 777 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 PECAM1P16284 738 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 SP100P23497 879 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 HOXD9P28356 352 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 GAD2Q05329 585 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 NR1H3Q13133 447 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 XRCC4Q13426 336 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 DHCR24Q15392 516 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 DRICH1Q6PGQ1 229 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 ZNF783Q6ZMS7 281 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CTAGE6Q86UF2 777 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 CTAGE4Q8IX94 777 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 BBS2Q9BXC9 721 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 BRD8Q9H0E9 1235 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 LRRC19Q9H756 370 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 NDFIP2Q9NV92 336 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 IGSF9Q9P2J2 1179 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 SAE1Q9UBE0 346 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-202ENST00000376237 MFHAS1Q9Y4C4 1052 aa23.54■■□□□ 1.36
HLA-C-202ENST00000376237 MCF2LO15068 1137 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 MFSD11O43934 449 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 RAMP2O60895 175 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 SLC10A2Q12908 348 aaPredicted RBP23.53■■□□□ 1.36
HLA-C-202ENST00000376237 CDH18Q13634 790 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 AAK1Q2M2I8 961 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 ANO4Q32M45 955 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 PARP15Q460N3 678 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 AFMIDQ63HM1 303 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 NPNTQ6UXI9 565 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 NPWQ8N729 165 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 C12orf50Q8NA57 414 aaPredicted RBP23.53■■□□□ 1.36
HLA-C-202ENST00000376237 HAUS1Q96CS2 278 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 ASIC4Q96FT7 647 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 MAGEH1Q9H213 219 aa23.53■■□□□ 1.36
HLA-C-202ENST00000376237 R3HDM2Q9Y2K5 976 aaKnown RBP23.53■■□□□ 1.36
HLA-C-202ENST00000376237 ILVBLA1L0T0 632 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms