RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 WDFY3Q8IZQ1 3526 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 RNASEH2AO75792 299 aaKnown RBP24■■□□□ 1.43
C9orf47-202ENST00000375850 C5AR1P21730 350 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 SLC8A1P32418 973 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
C9orf47-202ENST00000375850 SULT2A1Q06520 285 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 SMAD1Q15797 465 aaKnown RBP24■■□□□ 1.43
C9orf47-202ENST00000375850 TTC39BQ5VTQ0 682 aaPredicted RBP24■■□□□ 1.43
C9orf47-202ENST00000375850 SMYD5Q6GMV2 418 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 NCEH1Q6PIU2 408 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 SND1Q7KZF4 910 aaKnown RBP eCLIP24■■□□□ 1.43
C9orf47-202ENST00000375850 ENOSF1Q7L5Y1 443 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 TRIM59Q8IWR1 403 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 PPP1R9BQ96SB3 815 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 ELF4Q99607 663 aaPredicted RBP24■■□□□ 1.43
C9orf47-202ENST00000375850 SLC4A5Q9BY07 1137 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 POPDC2Q9HBU9 364 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 SCUBE2Q9NQ36 999 aa24■■□□□ 1.43
C9orf47-202ENST00000375850 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24■■□□□ 1.43
C9orf47-202ENST00000375850 FAM47DPA6NHR8 397 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MID1O15344 667 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MOCS2O96007 188 aaPredicted RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 AFPP02771 609 aaKnown RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 SLC2A3P11169 496 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 GOT1P17174 413 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 KCNH2Q12809 1159 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 COL9A2Q14055 689 aaPredicted RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 ELAVL3Q14576 367 aaKnown RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 SLC45A4Q5BKX6 768 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 TMEM110Q86TL2 294 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 TAC4Q86UU9 113 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 CHSY1Q86X52 802 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MMAAQ8IVH4 418 aaKnown RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 ARHGEF19Q8IW93 802 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 LGI2Q8N0V4 545 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 ATP6V0D2Q8N8Y2 350 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MDM1Q8TC05 714 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 ERCC4Q92889 916 aaPredicted RBP23.99■■□□□ 1.43
C9orf47-202ENST00000375850 NEUROG2Q9H2A3 272 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MTG2Q9H4K7 406 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 THAP9Q9H5L6 903 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 MAN1B1Q9UKM7 699 aa23.99■■□□□ 1.43
C9orf47-202ENST00000375850 A0A1W2PP55 124 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 C10orf142B7Z368 130 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 F5H5T6 163 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 KRT5P13647 590 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 CD44P16070 742 aaKnown RBP23.98■■□□□ 1.43
C9orf47-202ENST00000375850 CD38P28907 300 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 NUDT1P36639 197 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 YWHAZP63104 245 aaKnown RBP23.98■■□□□ 1.43
C9orf47-202ENST00000375850 ACAP1Q15027 740 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 FSCBQ5H9T9 825 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 KLHL10Q6JEL2 608 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 TMPRSS12Q86WS5 348 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 CFAP52Q8N1V2 620 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 PDCD7Q8N8D1 485 aaKnown RBP23.98■■□□□ 1.43
C9orf47-202ENST00000375850 NELFBQ8WX92 580 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 KREMEN1Q96MU8 473 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 SLC6A18Q96N87 628 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 SERGEFQ9UGK8 458 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.98■■□□□ 1.43
C9orf47-202ENST00000375850 DSPP15924 2871 aaKnown RBP23.98■■□□□ 1.43
C9orf47-202ENST00000375850 NUMA1Q14980 2115 aa23.98■■□□□ 1.43
C9orf47-202ENST00000375850 GOLGA8CPA6NN73 597 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 TTC34A8MYJ7 566 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 FGFR1OPO95684 399 aaKnown RBP23.97■■□□□ 1.43
C9orf47-202ENST00000375850 TRUB2O95900 331 aaKnown RBP23.97■■□□□ 1.43
C9orf47-202ENST00000375850 IGLV3-25P01717 112 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 C1SP09871 688 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 TACR2P21452 398 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 VASPP50552 380 aaPredicted RBP23.97■■□□□ 1.43
C9orf47-202ENST00000375850 KCNT1Q5JUK3 1230 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 SYPL2Q5VXT5 272 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 LAYNQ6UX15 382 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 DSG4Q86SJ6 1040 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 OXR1Q8N573 874 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 ADAM32Q8TC27 787 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 MYEOVQ96EZ4 313 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 INTS2Q9H0H0 1204 aaKnown RBP23.97■■□□□ 1.43
C9orf47-202ENST00000375850 KDM4CQ9H3R0 1056 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 GDF3Q9NR23 364 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 AASDHPPTQ9NRN7 309 aa23.97■■□□□ 1.43
C9orf47-202ENST00000375850 KCNU1A8MYU2 1149 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 KCNK3O14649 394 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 GLI1P08151 1106 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 HOXB3P14651 431 aaPredicted RBP23.96■■□□□ 1.43
C9orf47-202ENST00000375850 ARRB1P49407 418 aaPredicted RBP23.96■■□□□ 1.43
C9orf47-202ENST00000375850 ZC3H12AQ5D1E8 599 aaKnown RBP23.96■■□□□ 1.43
C9orf47-202ENST00000375850 RABGAP1LQ5R372 815 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 RAP1GAP2Q684P5 730 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 MMS22LQ6ZRQ5 1243 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 SPAG5Q96R06 1193 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 FAM129BQ96TA1 746 aa23.96■■□□□ 1.43
C9orf47-202ENST00000375850 CABIN1Q9Y6J0 2220 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 A0A1B0GVM2 712 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 TRABD2BA6NFA1 517 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 TCAF2A6NFQ2 919 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 PPP1R3GB7ZBB8 358 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 SLC7A4O43246 635 aa23.95■■□□□ 1.42
C9orf47-202ENST00000375850 LETM1O95202 739 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms