RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 KIAA1210Q9ULL0 1709 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 GSTM5P46439 218 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 BMPR2Q13873 1038 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 RXFP2Q8WXD0 754 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 FAM136AQ96C01 138 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 WDR27A2RRH5 827 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 CHD1O14646 1710 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 SYNCRIPO60506 623 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 SERPINF2P08697 491 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 PTAR1Q7Z6K3 402 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 RNASE11Q8TAA1 199 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 MYLPFQ96A32 169 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 TIMMDC1Q9NPL8 285 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 ACTL7BQ9Y614 415 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 E9PCH4 1651 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 CCDC162PA2VCL2 907 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 LIN7AO14910 233 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 OR6B1O95007 311 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 UNC5CO95185 931 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 YY1P25490 414 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 ALDH7A1P49419 539 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 PUDPQ08623 228 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 BST2Q10589 180 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 TTC23Q5W5X9 447 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 NANOGNBQ7Z5D8 188 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 PTCD3Q96EY7 689 aaKnown RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 CDH3P22223 829 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 ALDH9A1P49189 494 aa10.02□□□□□ -0.81
SPEN-201ENST00000375759 ZNF513Q8N8E2 541 aaPredicted RBP10.02□□□□□ -0.81
SPEN-201ENST00000375759 CCNT2O60583 730 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 RPLP2P05387 115 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 ACAP1Q15027 740 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PARK7Q99497 189 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 KIAA1683Q9H0B3 1180 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 SEC22BO75396 215 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ADSSP30520 456 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 TNK2Q07912 1038 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 DGCR6Q14129 220 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 SEMA6AQ9H2E6 1030 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 SPAG4Q9NPE6 437 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CLN6Q9NWW5 311 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 VPS51Q9UID3 782 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CORO2BQ9UQ03 480 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ICAM1P05362 532 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 GSSP48637 474 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 FCHO2Q0JRZ9 810 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ST3GAL1Q11201 340 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ZNF720Q7Z2F6 126 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 COMMD2Q86X83 199 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 EMC1Q8N766 993 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 METTL6Q8TCB7 284 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PLEKHG4BQ96PX9 1271 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 C8orf4Q9NR00 106 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 TCF7P36402 384 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 PTSQ03393 145 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 HTR3CQ8WXA8 447 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 S100A13Q99584 98 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 C3orf18Q9UK00 162 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CORO1CQ9ULV4 474 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 IFI35P80217 286 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 PDK3Q15120 406 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 OSBPL11Q9BXB4 747 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PRDM16Q9HAZ2 1276 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ING3Q9NXR8 418 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 NEXMIFQ5QGS0 1516 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 B3GAT3O94766 335 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ALOX5P09917 674 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 Q4G0T1 1027 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ABRAQ8N0Z2 381 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 FAM81AQ8TBF8 368 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PNPLA3Q9NST1 481 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 RPL26L1Q9UNX3 145 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 SREBF1P36956 1147 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 INTS11Q5TA45 600 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 MAGEE2Q8TD90 523 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 CRAMP1Q96RY5 1269 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 TRIM39Q9HCM9 518 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CYB561D2O14569 222 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 FGFR3P22607 806 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 QPRTQ15274 297 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 TAF5Q15542 800 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ZNF484Q5JVG2 852 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 MARC1Q5VT66 337 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 CBWD1Q9BRT8 395 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 PSMD12O00232 456 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 PIWIL2Q8TC59 973 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms