RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IRF6O14896 467 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 OXSR1O95747 527 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 UTS2BQ765I0 119 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 DENND6BQ8NEG7 585 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 C8orf48Q96LL4 319 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RACGAP1Q9H0H5 632 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 REEP1Q9H902 201 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 NPAP1Q9NZP6 1156 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PNMA3Q9UL41 463 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TULP3O75386 442 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 HTR2AP28223 471 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PRKCIP41743 596 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 CDKL4Q5MAI5 379 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PGBD2Q6P3X8 592 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TMC7Q7Z402 723 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ARMT1Q9H993 441 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 POLR3HQ9Y535 204 aaPredicted RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 PCDHGB6Q9Y5F9 930 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 NDUFS3O75489 264 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 PSAPP07602 524 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ASNSP08243 561 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GPALPP1Q8IXQ4 340 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 KCNB2Q92953 911 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SMURF2Q9HAU4 748 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 BBIP1A8MTZ0 92 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 POU4F1Q01851 419 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 CDK18Q07002 472 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ACAD10Q6JQN1 1059 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 MACC1Q6ZN28 852 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RNF32Q9H0A6 362 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 TRIM38O00635 465 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SCAMP1O15126 338 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 FOXR2Q6PJQ5 311 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GLYCTKQ8IVS8 523 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RDH11Q8TC12 318 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SLC7A3Q8WY07 619 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 KMT5AQ9NQR1 393 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 USP20Q9Y2K6 914 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 DHRS12A0PJE2 317 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SPARCP09486 303 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 ZC3H12AQ5D1E8 599 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 ZZZ3Q8IYH5 903 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RAB42Q8N4Z0 105 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 OR8K3Q8NH51 312 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 RNF139Q8WU17 664 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 AP2M1Q96CW1 435 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 SYNDIG1Q9H7V2 258 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
UBR4-204ENST00000375254 EIF3KQ9UBQ5 218 aaKnown RBP6.74□□□□□ -1.33
UBR4-204ENST00000375254 AFF2P51816 1311 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CCNB1P14635 433 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 FAM47BQ8NA70 645 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AMNQ9BXJ7 453 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 NEK6Q9HC98 313 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AAR2Q9Y312 384 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 PPP2R3BQ9Y5P8 575 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RASGRP1O95267 797 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZSCAN18Q8TBC5 510 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 TBC1D13Q9NVG8 400 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HEY1Q9Y5J3 304 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 PPP1R3GB7ZBB8 358 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 E7ENX8 843 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ADAM10O14672 748 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 KMOO15229 486 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.336e-7■□□□□ 10.9
UBR4-204ENST00000375254 SNX4O95219 450 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 GPIP06744 558 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 S100GP29377 79 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 LRRC41Q15345 812 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TCEAL5Q5H9L2 206 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ZCCHC12Q6PEW1 402 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CCDC24Q8N4L8 307 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CDYL2Q8N8U2 506 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 OR5J2Q8NH18 312 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TERB2Q8NHR7 220 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 HDAC2Q92769 488 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SIK2Q9H0K1 926 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CORO2BQ9UQ03 480 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 RRN3P2A6NIE6 340 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AP1S1P61966 158 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 TCIRG1Q13488 830 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 AUHQ13825 339 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 METTL16Q86W50 562 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 DCAF5Q96JK2 942 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MED10Q9BTT4 135 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 LRRC40Q9H9A6 602 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 ADPRHL2Q9NX46 363 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 APEX2Q9UBZ4 518 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 PLEKHA6Q9Y2H5 1048 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 IRS4O14654 1257 aaPredicted RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 DBTP11182 482 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 SDC4P31431 198 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 MAGEA6P43360 314 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CXXC5Q7LFL8 322 aaKnown RBP6.73□□□□□ -1.33
UBR4-204ENST00000375254 ANKMY2Q8IV38 441 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 CDK20Q8IZL9 346 aa6.73□□□□□ -1.33
UBR4-204ENST00000375254 SH3RF3Q8TEJ3 882 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms