RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PPM1AP35813 382 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 BRCC3P46736 316 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TRPC3Q13507 836 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 LAMB3Q13751 1172 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ACAP1Q15027 740 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 HADHQ16836 314 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 LIN52Q52LA3 116 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TDRD10Q5VZ19 366 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM270Q6UE05 265 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 Q7L0L9 218 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC26A11Q86WA9 606 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 GDPD5Q8WTR4 605 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF606Q8WXB4 792 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 JADE3Q92613 823 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 IQCGQ9H095 443 aaKnown RBP11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 PRDM12Q9H4Q4 367 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 ADAM28Q9UKQ2 775 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 PCDHGC3Q9UN70 934 aa11.78□□□□□ -0.52
TSPAN1-201ENST00000372003 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 EIF4E1BA6NMX2 242 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 C5orf67F2Z3F1 127 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 H3BNC9 293 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 PIRO00625 290 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 COPEO14579 308 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 GRM6O15303 877 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 CHADO15335 359 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 AP1G1O43747 822 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 KRT37O76014 449 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 IFNB1P01574 187 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 WEE2P0C1S8 567 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 PABPC4LP0CB38 370 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 AOC1P19801 751 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 BGNP21810 368 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 CA8P35219 290 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 RPL7AP62424 266 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 RBP5P82980 135 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ASPHQ12797 758 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 EFTUD2Q15029 972 aaKnown RBP eCLIP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ATP13A4Q4VNC1 1196 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 STXBP5Q5T5C0 1151 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 DCUN1D2Q6PH85 259 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 CAPN12Q6ZSI9 719 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 MARK2Q7KZI7 788 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ARCQ7LC44 396 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 TAS1R1Q7RTX1 841 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 KBTBD2Q8IY47 623 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ULK2Q8IYT8 1036 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 PHC3Q8NDX5 983 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ACTL9Q8TC94 416 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ELMO3Q96BJ8 720 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 FAM111AQ96PZ2 611 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 WDR83Q9BRX9 315 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 CCDC106Q9BWC9 280 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 GPR62Q9BZJ7 368 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 FBXO6Q9NRD1 293 aaPredicted RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 SIRPGQ9P1W8 387 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 SIX4Q9UIU6 781 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 ITGA11Q9UKX5 1188 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 PLLPQ9Y342 182 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
TSPAN1-201ENST00000372003 TRIOBPQ9H2D6 2365 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 SPTLC1O15269 473 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 VNN1O95497 513 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 SNRPAP09012 282 aaKnown RBP11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 AMPD1P23109 780 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 DNAJB1P25685 340 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 LSAMPQ13449 338 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 GRM2Q14416 872 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 CNPY1Q3B7I2 92 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 FAM171A1Q5VUB5 890 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 ANKRD22Q5VYY1 191 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 IZUMO2Q6UXV1 221 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 CRLF3Q8IUI8 442 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 RBM15BQ8NDT2 890 aaKnown RBP11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 E2F7Q96AV8 911 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 LRRC39Q96DD0 335 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 SERAC1Q96JX3 654 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 B3GALT6Q96L58 329 aa11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
TSPAN1-201ENST00000372003 METTL5Q9NRN9 209 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms