RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 USP12O75317 370 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 PGK1P00558 417 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 DBN1Q16643 649 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 FASTKD1Q53R41 847 aaKnown RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 N4BP2L1Q5TBK1 243 aaPredicted RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 MRPL10Q7Z7H8 261 aaKnown RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 TTC7BQ86TV6 843 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 ALYREFQ86V81 257 aaKnown RBP29.65■■■□□ 2.34
SSBP3-204ENST00000371320 MIPEPQ99797 713 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 RTP3Q9BQQ7 232 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 BFARQ9NZS9 450 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 DCDC2Q9UHG0 476 aa29.65■■■□□ 2.34
SSBP3-204ENST00000371320 KITP10721 976 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 CALB2P22676 271 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 ZNF135P52742 658 aaPredicted RBP29.64■■■□□ 2.34
SSBP3-204ENST00000371320 ZCCHC23Q6ZST2 131 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 METTL23Q86XA0 190 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 IFNL1Q8IU54 200 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.64■■■□□ 2.342e-6■■□□□ 14.4
SSBP3-204ENST00000371320 DNAAF3Q8N9W5 541 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 IRGQQ8WZA9 623 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 HDAC11Q96DB2 347 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 TACO1Q9BSH4 297 aaKnown RBP29.64■■■□□ 2.34
SSBP3-204ENST00000371320 VANGL2Q9ULK5 521 aa29.64■■■□□ 2.34
SSBP3-204ENST00000371320 SERPINB6P35237 376 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 GALNT2Q10471 571 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 FCRL3Q96P31 734 aaPredicted RBP29.64■■■□□ 2.33
SSBP3-204ENST00000371320 C20orf27Q9GZN8 174 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 NMUR2Q9GZQ4 415 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 WWP1Q9H0M0 922 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 THAP1Q9NVV9 213 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 MARCOQ9UEW3 520 aaPredicted RBP29.64■■■□□ 2.33
SSBP3-204ENST00000371320 TRHDEQ9UKU6 1024 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 EMCNQ9ULC0 261 aa29.64■■■□□ 2.33
SSBP3-204ENST00000371320 GSRP00390 522 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 BDNFP23560 247 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 GP5P40197 560 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 CDK18Q07002 472 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 PAN2Q504Q3 1202 aaKnown RBP29.63■■■□□ 2.33
SSBP3-204ENST00000371320 WASHC2DQ5SRD0 308 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 CPNE1Q99829 537 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 CADM1Q9BY67 442 aaKnown RBP29.63■■■□□ 2.33
SSBP3-204ENST00000371320 GBA3Q9H227 469 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 C15orf41Q9Y2V0 281 aa29.63■■■□□ 2.33
SSBP3-204ENST00000371320 HBS1LQ9Y450 684 aaKnown RBP29.63■■■□□ 2.33
SSBP3-204ENST00000371320 B3GAT3O94766 335 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ESRRAP11474 423 aaPredicted RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 MAP2K2P36507 400 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 GARSP41250 739 aaKnown RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 AQP5P55064 265 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 MGAT3Q09327 533 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 HSF5Q4G112 596 aaPredicted RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 FAM91A1Q658Y4 838 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 PM20D1Q6GTS8 502 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 RNF34Q969K3 372 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 PGLYRP2Q96PD5 576 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ACBD6Q9BR61 282 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 RPL26L1Q9UNX3 145 aaKnown RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ERI2A8K979 691 aaKnown RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 PLIN3O60664 434 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 LRIG2O94898 1065 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 POMCP01189 267 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 CD68P34810 354 aaPredicted RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ZBTB17Q13105 803 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 GRTP1Q5TC63 336 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ITPRIPL1Q6GPH6 555 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 TAC4Q86UU9 113 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 SMC1BQ8NDV3 1235 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ZNF669Q96BR6 464 aaPredicted RBP29.62■■■□□ 2.33
SSBP3-204ENST00000371320 SPC25Q9HBM1 224 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ZFYVE28Q9HCC9 887 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 CASS4Q9NQ75 786 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 ARMCX1Q9P291 453 aa29.62■■■□□ 2.33
SSBP3-204ENST00000371320 GYG2O15488 501 aa29.61■■■□□ 2.33
SSBP3-204ENST00000371320 KCTD11Q693B1 232 aa29.61■■■□□ 2.33
SSBP3-204ENST00000371320 FAM171BQ6P995 826 aa29.61■■■□□ 2.33
SSBP3-204ENST00000371320 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.61■■■□□ 2.33
SSBP3-204ENST00000371320 PADI3Q9ULW8 664 aa29.61■■■□□ 2.33
SSBP3-204ENST00000371320 TYK2P29597 1187 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 CD52P31358 61 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 THPOP40225 353 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 BRCC3P46736 316 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 RPL10AP62906 217 aaKnown RBP29.6■■■□□ 2.33
SSBP3-204ENST00000371320 RNPEPL1Q9HAU8 725 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 DMAP1Q9NPF5 467 aaPredicted RBP29.6■■■□□ 2.33
SSBP3-204ENST00000371320 PPARGC1AQ9UBK2 798 aaKnown RBP29.6■■■□□ 2.33
SSBP3-204ENST00000371320 PEX11AO75192 247 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 GM2AP17900 193 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 INSCQ1MX18 579 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 MBLAC2Q68D91 279 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 TMEM135Q86UB9 458 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 NSMCE1Q8WV22 266 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 VAT1Q99536 393 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 MLPHQ9BV36 600 aaPredicted RBP29.6■■■□□ 2.33
SSBP3-204ENST00000371320 DENND2DQ9H6A0 471 aaPredicted RBP29.6■■■□□ 2.33
SSBP3-204ENST00000371320 TRPM7Q96QT4 1865 aa29.6■■■□□ 2.33
SSBP3-204ENST00000371320 MGEA5O60502 916 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 ZNF623O75123 536 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 CYBAP13498 195 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 NFKB1P19838 968 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms