RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 C5orf22Q49AR2 442 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 ALFQ53S48 1182 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 FSCBQ5H9T9 825 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 PITRM1Q5JRX3 1037 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 MBLAC2Q68D91 279 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 SDE2Q6IQ49 451 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 SYT13Q7L8C5 426 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF683Q8IZ20 524 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 IL17RCQ8NAC3 791 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 PRSS33Q8NF86 280 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 EIF3CQ99613 913 aaKnown RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 SNRNP25Q9BV90 132 aaKnown RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 MUC3BQ9H195 1237 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 KCNH6Q9H252 994 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 DHX35Q9H5Z1 703 aaKnown RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 ELOVL2Q9NXB9 296 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.04
COL9A1-204ENST00000370496 EPN1Q9Y6I3 576 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-204ENST00000370496 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.03
COL9A1-204ENST00000370496 FAM72CH0Y354 149 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 LRIG2O94898 1065 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ATP5BP06576 529 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 HOXB2P14652 356 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 GJC1P36383 396 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 WASP42768 502 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 PTPN5P54829 565 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 TPI1P60174 286 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 SLC12A1Q13621 1099 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 SMTNL2Q2TAL5 461 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 PLEKHG6Q3KR16 790 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 FNDC3BQ53EP0 1204 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 C6orf118Q5T5N4 469 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 FAM72AQ5TYM5 149 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 MANEALQ5VSG8 457 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 FAM72DQ6L9T8 149 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 CXorf57Q6NSI4 855 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 TSSK4Q6SA08 328 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 RAD9BQ6WBX8 426 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ADIPOR2Q86V24 386 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 FAM72BQ86X60 149 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 PYROXD2Q8N2H3 581 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ARFGAP1Q8N6T3 406 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 SLC35G2Q8TBE7 412 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 CYB5D2Q8WUJ1 264 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 SORCS1Q8WY21 1168 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ANP32BQ92688 251 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 HHIPQ96QV1 700 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 ZWILCHQ9H900 591 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 CACNA2D2Q9NY47 1150 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 PPARGC1AQ9UBK2 798 aaKnown RBP15.26■□□□□ 0.03
COL9A1-204ENST00000370496 FBXO4Q9UKT5 387 aa15.26■□□□□ 0.03
COL9A1-204ENST00000370496 DRGXA6NNA5 263 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 SGK1O00141 431 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 EEF2KO00418 725 aaKnown RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 NPC1O15118 1278 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 TIMM44O43615 452 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 PROSCO94903 275 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 PAPSS2O95340 614 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 EPHB2P29323 1055 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 OR1E1P30953 314 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 NTSR1P30989 418 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 L1CAMP32004 1257 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 NUMBP49757 651 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 MRE11P49959 708 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 HADHQ16836 314 aaKnown RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 PPP6R3Q5H9R7 873 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 RNF219Q5W0B1 726 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 TMEM215Q68D42 235 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 SERPINA13PQ6UXR4 307 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 KIAA0907Q7Z7F0 614 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 KIAA1328Q86T90 577 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 TMEM139Q8IV31 216 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 ACRBPQ8NEB7 543 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 HSPH1Q92598 858 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 PPP1R9BQ96SB3 815 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 POLR3BQ9NW08 1133 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-204ENST00000370496 VPS28Q9UK41 221 aa15.25■□□□□ 0.03
COL9A1-204ENST00000370496 WDFY4Q6ZS81 3184 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 H0Y858 1186 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ADAM23O75077 832 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MTA2O94776 668 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ASLP04424 464 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 DLDP09622 509 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 CHRM1P11229 460 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 HNRNPLP14866 589 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 TCF4P15884 667 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 RHOQP17081 205 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 COL9A1P20849 921 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 MAN1A1P33908 653 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 HTR7P34969 479 aa15.24■□□□□ 0.03
COL9A1-204ENST00000370496 NOP2P46087 812 aaKnown RBP15.24■□□□□ 0.03
COL9A1-204ENST00000370496 ST8SIA6P61647 398 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms