RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ERVMER34-1Q9H9K5 563 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 LRRC4Q9HBW1 653 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 ARHGAP20Q9P2F6 1191 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 SLCO3A1Q9UIG8 710 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 MAPK8IP1Q9UQF2 711 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 CA5BQ9Y2D0 317 aa15.96■□□□□ 0.15
SSR4-204ENST00000370087 ITIH6Q6UXX5 1313 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 COL6A6A6NMZ7 2263 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 SIGLEC6O43699 453 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 ACSL4O60488 711 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 RNASEH1O60930 286 aaKnown RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 KRT10P13645 584 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 LCP1P13796 627 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 GOT1P17174 413 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 ME1P48163 572 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 STK19P49842 368 aaPredicted RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 ST8SIA6P61647 398 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 BST2Q10589 180 aaKnown RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 NFIL3Q16649 462 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 KRT39Q6A163 491 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 NAPEPLDQ6IQ20 393 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 SND1Q7KZF4 910 aaKnown RBP eCLIP15.95■□□□□ 0.146e-15■■■■■ 44.6
SSR4-204ENST00000370087 CARNMT1Q8N4J0 409 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 HJURPQ8NCD3 748 aaPredicted RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 CCDC150Q8NCX0 1101 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 EEF2KMTQ96G04 330 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 HIC2Q96JB3 615 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 LGMNQ99538 433 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 NUCKS1Q9H1E3 243 aaKnown RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 ABCC13Q9NSE7 274 aa15.95■□□□□ 0.14
SSR4-204ENST00000370087 TDRD6O60522 2096 aaKnown RBP15.95■□□□□ 0.14
SSR4-204ENST00000370087 EDDM13A0A1B0GTR0 161 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 MT-CO3P00414 261 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 ASLP04424 464 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 MPOP05164 745 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 KRT13P13646 458 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 MZF1P28698 734 aaPredicted RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 MAT2AP31153 395 aaKnown RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 RGS7P49802 495 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 MXI1P50539 228 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 SLC8A3P57103 927 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 LY6DQ14210 128 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 PKDCCQ504Y2 493 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 TAF1BQ53T94 588 aaPredicted RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 ARHGAP40Q5TG30 622 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 APCDD1Q8J025 514 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 SIX6OS1Q8N1H7 587 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 CACTIN-AS1Q8N1I8 211 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 SLC25A45Q8N413 288 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 PTPRN2Q92932 1015 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 RPL10LQ96L21 214 aaKnown RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 FCRL2Q96LA5 508 aaPredicted RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 DNAI2Q9GZS0 605 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 RAB20Q9NX57 234 aa15.94■□□□□ 0.14
SSR4-204ENST00000370087 XPO7Q9UIA9 1087 aaKnown RBP15.94■□□□□ 0.14
SSR4-204ENST00000370087 TARSL2A2RTX5 802 aaKnown RBP15.93■□□□□ 0.14
SSR4-204ENST00000370087 O00370 1275 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 IRAK2O43187 625 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 RTN2O75298 545 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 CALCAP01258 141 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 MYF5P13349 255 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 C5AR1P21730 350 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 SLC11A2P49281 568 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 TBX4P57082 545 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 MCCD1P59942 119 aaPredicted RBP15.93■□□□□ 0.14
SSR4-204ENST00000370087 ZCWPW2Q504Y3 356 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 SGO2Q562F6 1265 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 OXR1Q8N573 874 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 MFSD2AQ8NA29 543 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 KDM1BQ8NB78 822 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 FBXL13Q8NEE6 735 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 KCTD13Q8WZ19 329 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 FAM131CQ96AQ9 280 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.93■□□□□ 0.14
SSR4-204ENST00000370087 CNGB3Q9NQW8 809 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 UCKL1Q9NWZ5 548 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 CYTH4Q9UIA0 394 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 HECTD1Q9ULT8 2610 aa15.93■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3DA0A087WVF3 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3IA0A087WXS9 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3EA0A087X179 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3KA0A087X1G2 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3FA6NER0 549 aaPredicted RBP15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3LB9A6J9 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 LUC7L3O95232 432 aaKnown RBP15.92■□□□□ 0.14
SSR4-204ENST00000370087 ADH1BP00325 375 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 IL1BP01584 269 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 FYNP06241 537 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 SRPRAP08240 638 aaKnown RBP15.92■□□□□ 0.14
SSR4-204ENST00000370087 TBC1D3HP0C7X1 549 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 CD19P15391 556 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 GTF2H1P32780 548 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 PSMC2P35998 433 aaKnown RBP15.92■□□□□ 0.14
SSR4-204ENST00000370087 PCBP4P57723 403 aaKnown RBP15.92■□□□□ 0.14
SSR4-204ENST00000370087 ENPEPQ07075 957 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 CDH18Q13634 790 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 CBWD6Q4V339 395 aa15.92■□□□□ 0.14
SSR4-204ENST00000370087 DCAF6Q58WW2 860 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms