RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 C2CD4BA6NLJ0 364 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 ZMPSTE24O75844 475 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 PIK3R1P27986 724 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 NUDT2P50583 147 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 THOP1P52888 689 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 MRPS22P82650 360 aaKnown RBP17.83■□□□□ 0.45
CHTOP-203ENST00000368690 CDKL1Q00532 357 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 C6orf52Q5T4I8 152 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 Q6ZNX1 250 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 LILRA2Q8N149 483 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 TMEM102Q8N9M5 508 aaPredicted RBP17.83■□□□□ 0.45
CHTOP-203ENST00000368690 TSPAN14Q8NG11 270 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 RSPH1Q8WYR4 309 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 ABTB1Q969K4 478 aaPredicted RBP17.83■□□□□ 0.45
CHTOP-203ENST00000368690 TMEM143Q96AN5 459 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 CDHR1Q96JP9 859 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 TBCBQ99426 244 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 COPS7BQ9H9Q2 264 aaPredicted RBP17.83■□□□□ 0.45
CHTOP-203ENST00000368690 PLGRKTQ9HBL7 147 aa17.83■□□□□ 0.45
CHTOP-203ENST00000368690 LOC285556D6RIA3 1793 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 SH3PXD2BA1X283 911 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 HMGCRP04035 888 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 FAM163BP0C2L3 166 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 MAGEA12P43365 314 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 CD97P48960 835 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 ACTR2P61160 394 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 COG7P83436 770 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 POTEHQ6S545 545 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 LBX2Q6XYB7 198 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 RNF168Q8IYW5 571 aaPredicted RBP17.83■□□□□ 0.44
CHTOP-203ENST00000368690 SMYD1Q8NB12 490 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF670Q9BS34 389 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 NAT9Q9BTE0 207 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 BCO2Q9BYV7 579 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 TCF7L2Q9NQB0 619 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 MORF4L1Q9UBU8 362 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 ADAM28Q9UKQ2 775 aa17.83■□□□□ 0.44
CHTOP-203ENST00000368690 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.82■□□□□ 0.44
CHTOP-203ENST00000368690 METTL18O95568 372 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 EDN1P05305 212 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 ACADVLP49748 655 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 NUP107P57740 925 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 GK3PQ14409 553 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
CHTOP-203ENST00000368690 SREK1Q8WXA9 508 aaKnown RBP17.82■□□□□ 0.44
CHTOP-203ENST00000368690 CDRT15Q96T59 188 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 PKP2Q99959 881 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 TMEM216Q9P0N5 145 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 HEY1Q9Y5J3 304 aa17.82■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF701M0R085 212 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 DPYSL4O14531 572 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 KLHL41O60662 606 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 NR3C2P08235 984 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 SUPT20HL2P0C7V6 817 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 IDO1P14902 403 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 XRCC1P18887 633 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 ME2P23368 584 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 GARSP41250 739 aaKnown RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 TNFSF9P41273 254 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 SLC9B1Q4ZJI4 515 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 FAM102AQ5T9C2 384 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 SCARA5Q6ZMJ2 495 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 AMIGO2Q86SJ2 522 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 PCDH19Q8TAB3 1148 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF597Q96LX8 424 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 OSBPL11Q9BXB4 747 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 PCDH18Q9HCL0 1135 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 AIM2O14862 343 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 H6PDO95479 791 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 HSPA4LO95757 839 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF26P17031 533 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 FKBP1BP68106 108 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 TRIM67Q6ZTA4 783 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 SNX32Q86XE0 403 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 PRPF31Q8WWY3 499 aaKnown RBP17.81■□□□□ 0.44
CHTOP-203ENST00000368690 RXFP2Q8WXD0 754 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 CCT7Q99832 543 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 SPATC1LQ9H0A9 340 aa17.81■□□□□ 0.44
CHTOP-203ENST00000368690 TMEM221A6NGB7 291 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 OGTO15294 1046 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 TADA2AO75478 443 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 ZFXP17010 805 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 PGAM1P18669 254 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 ADORA2AP29274 412 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CBX3Q13185 183 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 SPIDRQ14159 915 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 SEZ6Q53EL9 994 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF781Q8N8C0 355 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 BHLHE22Q8NFJ8 381 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 HM13Q8TCT9 377 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 NUF2Q9BZD4 464 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 ZNF385DQ9H6B1 395 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
CHTOP-203ENST00000368690 ACOT8O14734 319 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 MDM4O15151 490 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 MICAL2O94851 1124 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 C8BP07358 591 aa17.8■□□□□ 0.44
CHTOP-203ENST00000368690 CYP2C8P10632 490 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms