RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SCAPQ12770 1279 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 SFSWAPQ12872 951 aaKnown RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 CST6Q15828 149 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 ZC3H12AQ5D1E8 599 aaKnown RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 ENOSF1Q7L5Y1 443 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 PROSER1Q86XN7 944 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 LGI2Q8N0V4 545 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 BTN2A3PQ96KV6 586 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 MED15Q96RN5 788 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 FAM129BQ96TA1 746 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 THAP9Q9H5L6 903 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 SERGEFQ9UGK8 458 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 BTBD3Q9Y2F9 522 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 EDDM13A0A1B0GTR0 161 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 TTC34A8MYJ7 566 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 KCNK3O14649 394 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 MID1O15344 667 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 PCDHGA12O60330 932 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
CKS1B-202ENST00000368436 MOCS3O95396 460 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 APOEP02649 317 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
CKS1B-202ENST00000368436 GNA15P30679 374 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 RACK1P63244 317 aaKnown RBP16.56■□□□□ 0.24
CKS1B-202ENST00000368436 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 RAP1GAP2Q684P5 730 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 TMPRSS7Q7RTY8 843 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 APCDD1Q8J025 514 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 GANCQ8TET4 914 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 PRMT1Q99873 361 aaKnown RBP16.56■□□□□ 0.24
CKS1B-202ENST00000368436 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 ACP6Q9NPH0 428 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.56■□□□□ 0.24
CKS1B-202ENST00000368436 TJP2Q9UDY2 1190 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 SLCO3A1Q9UIG8 710 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 FZD4Q9ULV1 537 aa16.56■□□□□ 0.24
CKS1B-202ENST00000368436 A0A1W2PP55 124 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 A0A1W2PPC4 97 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 BECN2A8MW95 431 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 KCNU1A8MYU2 1149 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 H0Y8X5 98 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 VILLO15195 856 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 THAP12O43422 761 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 DFNA5O60443 496 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 FGFR1OPO95684 399 aaKnown RBP16.55■□□□□ 0.24
CKS1B-202ENST00000368436 SLC8A1P32418 973 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 GRK6P43250 576 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 PLK1P53350 603 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 PITX1P78337 314 aaPredicted RBP16.55■□□□□ 0.24
CKS1B-202ENST00000368436 SLC12A1Q13621 1099 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 CHSY1Q86X52 802 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 MMAAQ8IVH4 418 aaKnown RBP16.55■□□□□ 0.24
CKS1B-202ENST00000368436 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 ATP6V0D2Q8N8Y2 350 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 OR2T34Q8NGX1 318 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 PTPRN2Q92932 1015 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 EBF2Q9HAK2 575 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 DMXL2Q8TDJ6 3036 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 ADAMTS20P59510 1910 aa16.55■□□□□ 0.24
CKS1B-202ENST00000368436 COL5A1P20908 1838 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-202ENST00000368436 LRRC72A6NJI9 287 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 F5H5T6 163 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 GLI1P08151 1106 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 CCT8P50990 548 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 PDCLQ13371 301 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 TAF5Q15542 800 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 SMYD5Q6GMV2 418 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 GJB7Q6PEY0 223 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 NCEH1Q6PIU2 408 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 TRIM65Q6PJ69 517 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 LRSAM1Q6UWE0 723 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 AADATQ8N5Z0 425 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 SLC6A18Q96N87 628 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 SLC2A13Q96QE2 648 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 OMDQ99983 421 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 ACE2Q9BYF1 805 aaPredicted RBP16.54■□□□□ 0.24
CKS1B-202ENST00000368436 SLC12A6Q9UHW9 1150 aa16.54■□□□□ 0.24
CKS1B-202ENST00000368436 A0A1B0GTQ1 180 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 FAM47DPA6NHR8 397 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 TNFSF14O43557 240 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 RNASEH2AO75792 299 aaKnown RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 ADH1BP00325 375 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 GOT1P17174 413 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 SLC9A1P19634 815 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 C5AR1P21730 350 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 CCR5P51681 352 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 RNF219Q5W0B1 726 aaPredicted RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 SND1Q7KZF4 910 aaKnown RBP eCLIP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 ADAT2Q7Z6V5 191 aaKnown RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 DEFB106AQ8N104 65 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms