RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TNFSF15O95150 251 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 GJB6O95452 261 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 ITGA2BP08514 1039 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 DRD3P35462 400 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 CCR10P46092 362 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 HARS2P49590 506 aaKnown RBP15.23■□□□□ 0.03
VAMP4-202ENST00000367740 INHBCP55103 352 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 ZNF445P59923 1031 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 ST8SIA6P61647 398 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 PRPF39Q86UA1 669 aaKnown RBP15.23■□□□□ 0.03
VAMP4-202ENST00000367740 TMA16Q96EY4 203 aaKnown RBP15.23■□□□□ 0.03
VAMP4-202ENST00000367740 LMLNQ96KR4 655 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 SLC25A18Q9H1K4 315 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 USP29Q9HBJ7 922 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 PANK4Q9NVE7 773 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 STOML2Q9UJZ1 356 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 DMTF1Q9Y222 760 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 SCN8AQ9UQD0 1980 aa15.23■□□□□ 0.03
VAMP4-202ENST00000367740 ZFC3H1O60293 1989 aaKnown RBP15.22■□□□□ 0.03
VAMP4-202ENST00000367740 NOBOXO60393 691 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 PHACTR2O75167 634 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 ADH1BP00325 375 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 THEGLP0DJG4 465 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 ALPPL2P10696 532 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 C5AR1P21730 350 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 AFMP43652 599 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 CASP4P49662 377 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 KCNMA1Q12791 1236 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 STAT4Q14765 748 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 TGIF1Q15583 401 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 IGFBP7Q16270 282 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 TBR1Q16650 682 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 POM121L1PQ3SYA9 428 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 RBM44Q6ZP01 1051 aaKnown RBP15.22■□□□□ 0.03
VAMP4-202ENST00000367740 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 RSRC2Q7L4I2 434 aaKnown RBP15.22■□□□□ 0.03
VAMP4-202ENST00000367740 UNC93AQ86WB7 457 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 FAM26EQ8N5C1 309 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
VAMP4-202ENST00000367740 TTC17Q96AE7 1141 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 FAM131CQ96AQ9 280 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 ARRDC3Q96B67 414 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 TWNKQ96RR1 684 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 AGPAT3Q9NRZ7 376 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 KLHL11Q9NVR0 708 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 ABCA12Q86UK0 2595 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 CENPEQ02224 2701 aa15.22■□□□□ 0.03
VAMP4-202ENST00000367740 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
VAMP4-202ENST00000367740 TTC34A8MYJ7 566 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 KRT38O76015 456 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 VNN1O95497 513 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 NUDT1P36639 197 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 CSKP41240 450 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 PDX1P52945 283 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 METAP1P53582 386 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 BIRC3Q13489 604 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 NCOA4Q13772 614 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 TRIM69Q86WT6 500 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 TMEM145Q8NBT3 493 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 KLHDC7BQ96G42 594 aa15.21■□□□□ 0.03
VAMP4-202ENST00000367740 INTS6Q9UL03 887 aaKnown RBP15.21■□□□□ 0.03
VAMP4-202ENST00000367740 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 PRAMEF26H0Y7S4 382 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 K7ESM1 405 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 CASC3O15234 703 aaKnown RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 PLRG1O43660 514 aaKnown RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 STX6O43752 255 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 RTN2O75298 545 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 NEBLO76041 1014 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 ASLP04424 464 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 MZF1P28698 734 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 ASPAP45381 313 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 CYP2J2P51589 502 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 CLCA4Q14CN2 919 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 SKIDA1Q1XH10 827 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 ADGRF1Q5T601 910 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 GUSBP11Q6P575 273 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 PTRH1Q86Y79 214 aaKnown RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 STK40Q8N2I9 435 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 KDM1BQ8NB78 822 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 KDM4CQ9H3R0 1056 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 EVA1BQ9NVM1 165 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 GEMIN8Q9NWZ8 242 aaKnown RBP15.2■□□□□ 0.02
VAMP4-202ENST00000367740 PCDHGA4Q9Y5G9 962 aa15.2■□□□□ 0.02
VAMP4-202ENST00000367740 CCDC187A0A096LP49 1063 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 SCAMP1O15126 338 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CLIC2O15247 247 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 TBL1XO60907 577 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 KIF20AO95235 890 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 LATS1O95835 1130 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 IL1BP01584 269 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 SLC5A2P31639 672 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CTSOP43234 321 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms