RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ACAD10Q6JQN1 1059 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 FBXL22Q6P050 247 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 SND1Q7KZF4 910 aaKnown RBP eCLIP15.14■□□□□ 0.011e-12■■□□□ 13.6
SF3B5-201ENST00000367569 MCOLN2Q8IZK6 566 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 PGBD3Q8N328 593 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 DDX50Q9BQ39 737 aaKnown RBP15.14■□□□□ 0.01
SF3B5-201ENST00000367569 MAGEB5Q9BZ81 275 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 MTG2Q9H4K7 406 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 POLMQ9NP87 494 aaPredicted RBP15.14■□□□□ 0.01
SF3B5-201ENST00000367569 SLC27A6Q9Y2P4 619 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 STON1Q9Y6Q2 735 aa15.14■□□□□ 0.01
SF3B5-201ENST00000367569 USP24Q9UPU5 2620 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 LNP1A1A4G5 178 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 C2CD4BA6NLJ0 364 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 H0Y626 953 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 KRT37O76014 449 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CNTN5O94779 1100 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 KRT3P12035 628 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 GPD1P21695 349 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 PMLP29590 882 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 P2RY2P41231 377 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CSKP41240 450 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 PRKCIP41743 596 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CTSOP43234 321 aaPredicted RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 DHPSP49366 369 aaPredicted RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CXCR3P49682 368 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 RPL7AP62424 266 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 OGDHQ02218 1023 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 AUHQ13825 339 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 PREPLQ4J6C6 727 aaPredicted RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 FNDC3BQ53EP0 1204 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 MBLAC2Q68D91 279 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 NUDT18Q6ZVK8 323 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 ADIPOR2Q86V24 386 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 CCDC185Q8N715 623 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 C3orf20Q8ND61 904 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 FAM172AQ8WUF8 416 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 NT5C3BQ969T7 300 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 AZIN2Q96A70 460 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 TRIM7Q9C029 511 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 WDCPQ9H6R7 721 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 ELOVL2Q9NXB9 296 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 ARHGEF38Q9NXL2 777 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 AIPL1Q9NZN9 384 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 MBD1Q9UIS9 605 aaPredicted RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 INTS6Q9UL03 887 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 PI4KAP42356 2102 aa15.13■□□□□ 0.01
SF3B5-201ENST00000367569 TNRC6BQ9UPQ9 1833 aaKnown RBP15.13■□□□□ 0.01
SF3B5-201ENST00000367569 A0A1W2PQF6 199 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 A0A1W2PQJ5 194 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 TCRBV5S1A1TA0A578 114 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
SF3B5-201ENST00000367569 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 TPM3P06753 285 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 SLC2A3P11169 496 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 GABRG2P18507 467 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 ZBED6P86452 979 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 MAP7D1Q3KQU3 841 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 ALFQ53S48 1182 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 RABGAP1LQ5R372 815 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 WDR59Q6PJI9 974 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 KIAA1324Q6UXG2 1013 aaKnown RBP15.12■□□□□ 0.01
SF3B5-201ENST00000367569 SERPINA13PQ6UXR4 307 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 CYP2U1Q7Z449 544 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 TRMT11Q7Z4G4 463 aaKnown RBP15.12■□□□□ 0.01
SF3B5-201ENST00000367569 TFAP2DQ7Z6R9 452 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 APCDD1Q8J025 514 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 AHI1Q8N157 1196 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 PIGKQ92643 395 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 NUP58Q9BVL2 599 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 SLC2A11Q9BYW1 496 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 RBSNQ9H1K0 784 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 RRN3Q9NYV6 651 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 MPP6Q9NZW5 540 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 CAPN11Q9UMQ6 739 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 STARD13Q9Y3M8 1113 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 ITIH6Q6UXX5 1313 aa15.12■□□□□ 0.01
SF3B5-201ENST00000367569 ZFHX4Q86UP3 3567 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 ASCC3Q8N3C0 2202 aaKnown RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 MAP3K13O43283 966 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 SRGAP2O75044 1071 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 EPHX1P07099 455 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 NDUFV2P19404 249 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 MZF1P28698 734 aaPredicted RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 PTGER3P43115 390 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 STK19P49842 368 aaPredicted RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 HDAC4P56524 1084 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 IRX4P78413 519 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 PTPRNQ16849 979 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms