RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 HNF4GQ14541 408 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 DUSP6Q16828 381 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MINDY4Q4G0A6 757 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 KHDC1Q4VXA5 237 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 XKR9Q5GH70 373 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 THEMIS2Q5TEJ8 643 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 CACHD1Q5VU97 1274 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC35E4Q6ICL7 350 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 KRTAP5-10Q6L8G5 202 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 LCTLQ6UWM7 567 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 DHRS13Q6UX07 377 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 FAM90A1Q86YD7 464 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MARCH9Q86YJ5 346 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 GPSM1Q86YR5 675 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 P3H2Q8IVL5 708 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PARP8Q8N3A8 854 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 KBTBD3Q8NAB2 608 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF114Q8NC26 417 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 CLRN3Q8NCR9 226 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MBD3L2Q8NHZ7 208 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 NSUN6Q8TEA1 469 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 LMBR1Q8WVP7 490 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 THAP4Q8WY91 577 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF419Q96HQ0 510 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TXNDC15Q96J42 360 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZBTB45Q96K62 511 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 AGAP3Q96P47 875 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 IWS1Q96ST2 819 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 C1orf43Q9BWL3 253 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 LDHAL6BQ9BYZ2 381 aaPredicted RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PLA2G12AQ9BZM1 189 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 MAGEH1Q9H213 219 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 PNRC2Q9NPJ4 139 aaKnown RBP0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 XPR1Q9UBH6 696 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 STEAP1Q9UHE8 339 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 POMT2Q9UKY4 750 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 TMX2Q9Y320 296 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC4A4Q9Y6R1 1079 aa0.24□□□□□ -2.37
RNU6-54P-201ENST00000365563 A6NNZ2 444 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 CAPN9O14815 690 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ITM2AO43736 263 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 SOX30O94993 753 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ALDH2P05091 517 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC5A1P13866 664 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF32P17041 273 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 CEBPBP17676 345 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 CD53P19397 219 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 MATN1P21941 496 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 NDUFS1P28331 727 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 DUSP1P28562 367 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ERCC5P28715 1186 aaPredicted RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 HOXA13P31271 388 aaPredicted RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC5A2P31639 672 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 UQCRC1P31930 480 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 LIFRP42702 1097 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 FMO5P49326 533 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 TIAL1Q01085 375 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 PMPCAQ10713 525 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 PABPC4Q13310 644 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 GPR157Q5UAW9 335 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 KRT26Q7Z3Y9 468 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 IGFN1Q86VF2 1251 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 LRRTM3Q86VH5 581 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 GAS2L3Q86XJ1 694 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 RHPN2Q8IUC4 686 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 AMOTL1Q8IY63 956 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 MIGA1Q8NAN2 632 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 PCSK9Q8NBP7 692 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 C3orf20Q8ND61 904 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF473Q8WTR7 871 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 NPIPB3Q92617 1050 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 AKAP1Q92667 903 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 PMM1Q92871 262 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 GJA10Q969M2 543 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 PPP2R3CQ969Q6 453 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF845Q96IR2 970 aaPredicted RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 FAM167AQ96KS9 214 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 DNAJC7Q99615 494 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 VRK1Q99986 396 aaPredicted RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 MESP1Q9BRJ9 268 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 POLDIP3Q9BY77 421 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 B3GNT4Q9C0J1 378 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 GBA2Q9HCG7 927 aaPredicted RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 BARHL2Q9NY43 387 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 SNTG2Q9NY99 539 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 RALYQ9UKM9 306 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 HDAC9Q9UKV0 1011 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 APOBEC2Q9Y235 224 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 VDAC3Q9Y277 283 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 WBP11Q9Y2W2 641 aaKnown RBP0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 DAAM1Q9Y4D1 1078 aa0.23□□□□□ -2.37
RNU6-54P-201ENST00000365563 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 C16orf96A6NNT2 1141 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 H0Y9J4 135 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC16A6O15403 523 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 RGS10O43665 173 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 CEP104O60308 925 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 MARCH6O60337 910 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SRGAP2O75044 1071 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms