RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF77Q15935 545 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 ARTNQ5T4W7 220 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 FBXL22Q6P050 247 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 TMCO3Q6UWJ1 677 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 PLD5Q8N7P1 536 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 PRELID2Q8N945 189 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 HAUS1Q96CS2 278 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 RPRD1AQ96P16 312 aaPredicted RBP21.25■□□□□ 0.99
SHISA4-201ENST00000362011 FRMD8P1Q9BZ68 369 aaPredicted RBP21.25■□□□□ 0.99
SHISA4-201ENST00000362011 ZYG11BQ9C0D3 744 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 RBM12Q9NTZ6 932 aaKnown RBP21.25■□□□□ 0.99
SHISA4-201ENST00000362011 GDE1Q9NZC3 331 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 NR2E1Q9Y466 385 aa21.25■□□□□ 0.99
SHISA4-201ENST00000362011 DRGXA6NNA5 263 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 PAFAH1B3Q15102 231 aaKnown RBP21.24■□□□□ 0.99
SHISA4-201ENST00000362011 CYP1B1Q16678 543 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 C5orf22Q49AR2 442 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 RABGAP1LQ5R372 815 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 RFWD3Q6PCD5 774 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 C1orf228Q6PIY5 440 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 NPNTQ6UXI9 565 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 FAM217AQ8IXS0 508 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 CELF5Q8N6W0 485 aaKnown RBP21.24■□□□□ 0.99
SHISA4-201ENST00000362011 C12orf50Q8NA57 414 aaPredicted RBP21.24■□□□□ 0.99
SHISA4-201ENST00000362011 P3H4Q92791 437 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 IGSF8Q969P0 613 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 IRF2BPLQ9H1B7 796 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 ETNK2Q9NVF9 386 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 CDH7Q9ULB5 785 aa21.24■□□□□ 0.99
SHISA4-201ENST00000362011 R3HDM2Q9Y2K5 976 aaKnown RBP21.24■□□□□ 0.99
SHISA4-201ENST00000362011 CACNA1HO95180 2353 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 WASH4PA8MWX3 477 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
SHISA4-201ENST00000362011 RHOQP17081 205 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 SERPINB6P35237 376 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 OTUD4Q01804 1114 aaKnown RBP21.23■□□□□ 0.99
SHISA4-201ENST00000362011 NOMO1Q15155 1222 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 CCNG2Q16589 344 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 BBS7Q8IWZ6 715 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 CPXM2Q8N436 756 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 RTL3Q8N8U3 475 aaKnown RBP21.23■□□□□ 0.99
SHISA4-201ENST00000362011 C1orf54Q8WWF1 131 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 SMARCD2Q92925 531 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 MAGOHBQ96A72 148 aaKnown RBP21.23■□□□□ 0.99
SHISA4-201ENST00000362011 ASB16Q96NS5 453 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 NECTIN4Q96NY8 510 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 DONSONQ9NYP3 566 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 MFHAS1Q9Y4C4 1052 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 HEY1Q9Y5J3 304 aa21.23■□□□□ 0.99
SHISA4-201ENST00000362011 MFSD11O43934 449 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 PECAM1P16284 738 aaPredicted RBP21.22■□□□□ 0.99
SHISA4-201ENST00000362011 CHKAP35790 457 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 NR2C2P49116 596 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 FAM78AQ5JUQ0 283 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 TTC39BQ5VTQ0 682 aaPredicted RBP21.22■□□□□ 0.99
SHISA4-201ENST00000362011 BZW1Q7L1Q6 419 aaKnown RBP21.22■□□□□ 0.99
SHISA4-201ENST00000362011 KLHL7Q8IXQ5 586 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 LRRN4CLQ8ND94 238 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 ACTL9Q8TC94 416 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 ATG4AQ8WYN0 398 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 PRICKLE1Q96MT3 831 aaPredicted RBP21.22■□□□□ 0.99
SHISA4-201ENST00000362011 DDX47Q9H0S4 455 aaKnown RBP21.22■□□□□ 0.99
SHISA4-201ENST00000362011 POMKQ9H5K3 350 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 RETREG1Q9H6L5 497 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 LRRC19Q9H756 370 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 TMEM248Q9NWD8 314 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 MPP6Q9NZW5 540 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 TBC1D14Q9P2M4 693 aa21.22■□□□□ 0.99
SHISA4-201ENST00000362011 TYW5A2RUC4 315 aaKnown RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 PROB1E7EW31 1015 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 TRDMT1O14717 391 aaKnown RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 MCF2LO15068 1137 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 TSPAN3O60637 253 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 PDGFBP01127 241 aaPredicted RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 CHRNA3P32297 505 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 GBP2P32456 591 aaPredicted RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 IRAK1P51617 712 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 SNX1Q13596 522 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 NLRP14Q86W24 1093 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 UBALD2Q8IYN6 164 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 MMGT1Q8N4V1 131 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 LZTR1Q8N653 840 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 KIAA1958Q8N8K9 716 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 RIN3Q8TB24 985 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 MYEOVQ96EZ4 313 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 RUNDC3BQ96NL0 473 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 MYADMQ96S97 322 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 KRT12Q99456 494 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 FAM118BQ9BPY3 351 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 TRPV4Q9HBA0 871 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 OBP2AQ9NY56 170 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 SAE1Q9UBE0 346 aaPredicted RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 RAD54BQ9Y620 910 aa21.21■□□□□ 0.99
SHISA4-201ENST00000362011 ZFP37Q9Y6Q3 630 aaPredicted RBP21.21■□□□□ 0.99
SHISA4-201ENST00000362011 SLC9A3R1O14745 358 aaPredicted RBP21.2■□□□□ 0.98
SHISA4-201ENST00000362011 LIASO43766 372 aa21.2■□□□□ 0.98
SHISA4-201ENST00000362011 CNTN5O94779 1100 aa21.2■□□□□ 0.98
SHISA4-201ENST00000362011 COILP38432 576 aaPredicted RBP21.2■□□□□ 0.98
SHISA4-201ENST00000362011 FNTAP49354 379 aa21.2■□□□□ 0.98
SHISA4-201ENST00000362011 EIF3EP60228 445 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms