RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 SKA2Q8WVK7 121 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-202ENST00000361781 MFSD3Q96ES6 412 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 VPS50Q96JG6 964 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 ACE2Q9BYF1 805 aaPredicted RBP13.96□□□□□ -0.17
SGMS1-202ENST00000361781 GNEQ9Y223 722 aaKnown RBP13.96□□□□□ -0.17
SGMS1-202ENST00000361781 COMMD3-BMI1R4GMX3 469 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 PABPN1LA6NDY0 278 aaKnown RBP13.96□□□□□ -0.17
SGMS1-202ENST00000361781 F8W8V4 182 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 ABLIM1O14639 778 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 SRP72O76094 671 aaKnown RBP13.96□□□□□ -0.17
SGMS1-202ENST00000361781 C2P06681 752 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 PIK3R1P27986 724 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 RGS2P41220 211 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 GABRB2P47870 512 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 CCNA1P78396 465 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 KBTBD2Q8IY47 623 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 ANKLE1Q8NAG6 615 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 URGCPQ8TCY9 931 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 NCLNQ969V3 563 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 SKA1Q96BD8 255 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 CIB1Q99828 191 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 NDUFA13Q9P0J0 144 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 PCDHA11Q9Y5I1 949 aa13.96□□□□□ -0.17
SGMS1-202ENST00000361781 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.18
SGMS1-202ENST00000361781 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 STRNO43815 780 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 PLIN3O60664 434 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CHRNGP07510 517 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 STMN1P16949 149 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 PAMP19021 973 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 UTS2BQ765I0 119 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 P2RY11Q96G91 374 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 AGAP2Q99490 1192 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 LIN28AQ9H9Z2 209 aaKnown RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 COPG2Q9UBF2 871 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CITO14578 2027 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 NCF1BA6NI72 391 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 NCF1CA8MVU1 366 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 HBP1O60381 514 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 NCF1P14598 390 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 PGAM1P18669 254 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CRHR1P34998 444 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 SP2Q02086 613 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 ARCQ7LC44 396 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 GPR141Q7Z602 305 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 FBXW8Q8N3Y1 598 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 DCPSQ96C86 337 aaKnown RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CHCHD3Q9NX63 227 aaKnown RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 ERAP1Q9NZ08 941 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TEX264Q9Y6I9 313 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 A0A0A0MRY4 1105 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 BUD23O43709 281 aaKnown RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TMCC1O94876 653 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 CNTFP26441 200 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 IDH3AP50213 366 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 ACBD5Q5T8D3 534 aaPredicted RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 SLC41A1Q8IVJ1 513 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 SPATA13Q96N96 652 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TBCBQ99426 244 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 EGFL7Q9UHF1 273 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
SGMS1-202ENST00000361781 NOD1Q9Y239 953 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 PSAT1Q9Y617 370 aa13.95□□□□□ -0.18
SGMS1-202ENST00000361781 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 MAP3K13O43283 966 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 TIMM44O43615 452 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 PARNO95453 639 aaKnown RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 MT-ND1P03886 318 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 PTPN7P35236 360 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 STX5Q13190 355 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 PITRM1Q5JRX3 1037 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 LRRC39Q96DD0 335 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 RMND5BQ96G75 393 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 OSMRQ99650 979 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 NAT9Q9BTE0 207 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 DOLKQ9UPQ8 538 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 ATRNL1Q5VV63 1379 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 GPR25O00155 361 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 HMBSP08397 361 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 ZNF23P17027 643 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 GRIA3P42263 894 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 CCR10P46092 362 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 RPL14P50914 215 aaKnown RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 ZNF460Q14592 562 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 LRRC8BQ6P9F7 803 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
SGMS1-202ENST00000361781 EMID1Q96A84 441 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-202ENST00000361781 PEBP4Q96S96 227 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms