RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PRPF4O43172 522 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■■■■■ 27.5
SCAF1-201ENST00000360565 CLASP2O75122 1294 aaKnown RBP16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CFHP08603 1231 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 BNIP1Q12981 228 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 GALNTL6Q49A17 601 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 GRAMD4Q6IC98 578 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 NEPROQ6NW34 567 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CLNKQ7Z7G1 428 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 P2RY11Q96G91 374 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CDHR5Q9HBB8 845 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 MAN1C1Q9NR34 630 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 KCNH4Q9UQ05 1017 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 A8MUI8 341 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 RAMP2O60895 175 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CYBBP04839 570 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 ICAM3P32942 547 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 TBX4P57082 545 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 SWT1Q5T5J6 900 aaKnown RBP16.67■□□□□ 0.26
SCAF1-201ENST00000360565 SLC4A11Q8NBS3 891 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 PPP2R3CQ969Q6 453 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 PRKD2Q9BZL6 878 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 MMADHCQ9H3L0 296 aaPredicted RBP16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CCDC167Q9P0B6 97 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 H0Y626 953 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 TSPAN3O60637 253 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 SERPINF2P08697 491 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 RAG1P15918 1043 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 PSMC3P17980 439 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 PKNOX1P55347 436 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 TTC33Q6PID6 262 aaPredicted RBP16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CMC1Q7Z7K0 106 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 GDPD5Q8WTR4 605 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 THUMPD3Q9BV44 507 aaKnown RBP16.67■□□□□ 0.26
SCAF1-201ENST00000360565 COLEC11Q9BWP8 271 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 LGALS13Q9UHV8 139 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 CRLS1Q9UJA2 301 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 LRP6O75581 1613 aa16.67■□□□□ 0.26
SCAF1-201ENST00000360565 TPBGLP0DKB5 382 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 SMIM10L2AP0DMW4 78 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 SMIM10L2BP0DMW5 78 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 PAX7P23759 505 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 PSMA4P25789 261 aaKnown RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 HSPA13P48723 471 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 FSCN1Q16658 493 aaKnown RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 PMF1Q6P1K2 205 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF786Q8N393 782 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 MYH6P13533 1939 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 LYPLA1O75608 230 aaPredicted RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 CRABP2P29373 138 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ALDH1A3P47895 512 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 TTC23LQ6PF05 361 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 TBL1YQ9BQ87 522 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ARL8BQ9NVJ2 186 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF212Q9UDV6 495 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 TUBGCP4Q9UGJ1 667 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 MOSPD1Q9UJG1 213 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF536O15090 1300 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 FAM95CA0A1B0GW59 222 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 SPTLC1O15269 473 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 TMCC1O94876 653 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 MAP4P27816 1152 aaKnown RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 OXCT1P55809 520 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ARCQ7LC44 396 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 FAM13CQ8NE31 585 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 HEATR9A2RTY3 570 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 SOWAHBA6NEL2 793 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 CLPTM1O96005 669 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 CDH18Q13634 790 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 UBAP2LQ14157 1087 aaKnown RBP16.66■□□□□ 0.26
SCAF1-201ENST00000360565 KRT33BQ14525 404 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ZBTB49Q6ZSB9 765 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 RNF217Q8TC41 542 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 ACMSDQ8TDX5 336 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 GANCQ8TET4 914 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 VPS50Q96JG6 964 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 CSPG4P5Q96PW8 444 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 NMUR2Q9GZQ4 415 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 VTI1BQ9UEU0 232 aa16.66■□□□□ 0.26
SCAF1-201ENST00000360565 CBX4O00257 560 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 ME2P23368 584 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 OR1E1P30953 314 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 CXCL17Q6UXB2 119 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 TMEM86AQ8N2M4 240 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 C17orf80Q9BSJ5 609 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
SCAF1-201ENST00000360565 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
SCAF1-201ENST00000360565 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms