RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CATSPERBQ9H7T0 1116 aa19.73■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PPARGC1AQ9UBK2 798 aaKnown RBP19.73■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PLA2G4CQ9UP65 541 aa19.73■□□□□ 0.75
HLA-DRB1-201ENST00000360004 DRGXA6NNA5 263 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PRRT4C9JH25 899 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 EEF2KO00418 725 aaKnown RBP19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ZBTB24O43167 697 aaPredicted RBP19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ARHGAP6O43182 974 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 SPOPO43791 374 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 LRIG2O94898 1065 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ARL4AP40617 200 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 CSKP41240 450 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 CXCL12P48061 93 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 IRAK1P51617 712 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 VAV2P52735 878 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ST8SIA6P61647 398 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 NRG1Q02297 640 aaPredicted RBP19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FZD5Q13467 585 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 SLC12A1Q13621 1099 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FNDC3BQ53EP0 1204 aaKnown RBP19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ALFQ53S48 1182 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 EOGTQ5NDL2 527 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 EMC10Q5UCC4 262 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 MBLAC2Q68D91 279 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ZNF354CQ86Y25 554 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 TMEM139Q8IV31 216 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 C1orf210Q8IVY1 113 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ALLCQ8N6M5 410 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 KCNV2Q8TDN2 545 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 USP33Q8TEY7 942 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PEBP4Q96S96 227 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ZDHHC4Q9NPG8 344 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ELOVL2Q9NXB9 296 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 DLGAP2Q9P1A6 1054 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 VPS28Q9UK41 221 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 HCN4Q9Y3Q4 1203 aa19.72■□□□□ 0.75
HLA-DRB1-201ENST00000360004 A0A0A0MRY4 1105 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FAM72CH0Y354 149 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 H3BRJ5 948 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 MTA2O94776 668 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 TNNT1P13805 278 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 RHOQP17081 205 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 MAN1A1P33908 653 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 WASP42768 502 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 NUBP1P53384 320 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 KIF5AQ12840 1032 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 DMC1Q14565 340 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 C5orf22Q49AR2 442 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 HSF5Q4G112 596 aaPredicted RBP19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FSCBQ5H9T9 825 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PITRM1Q5JRX3 1037 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 KCNT1Q5JUK3 1230 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FAM72AQ5TYM5 149 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 EGFLAMQ63HQ2 1017 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FAM72DQ6L9T8 149 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 FAM72BQ86X60 149 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PSTKQ8IV42 348 aaKnown RBP19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 LRRC8AQ8IWT6 810 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 ARFGAP1Q8N6T3 406 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 TXNDC5Q8NBS9 432 aaKnown RBP19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 PRRX2Q99811 253 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 MAGEB5Q9BZ81 275 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 DONSONQ9NYP3 566 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 TFR2Q9UP52 801 aa19.71■□□□□ 0.75
HLA-DRB1-201ENST00000360004 KIAA1549LQ6ZVL6 1849 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 IGLV3-10A0A075B6K4 115 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 A0A0A6YYK5 440 aaPredicted RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 FGF10O15520 208 aaPredicted RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 GALR2O43603 387 aaPredicted RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 KRT7P08729 469 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 HTR7P34969 479 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 NUMBP49757 651 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 IFI16Q16666 785 aaKnown RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 FUT11Q495W5 492 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 SERPINA13PQ6UXR4 307 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 SETD3Q86TU7 594 aaPredicted RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 ZNF683Q8IZ20 524 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 KCTD15Q96SI1 283 aaPredicted RBP19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 SPON2Q9BUD6 331 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 STARD13Q9Y3M8 1113 aa19.7■□□□□ 0.74
HLA-DRB1-201ENST00000360004 ZDBF2Q9HCK1 2354 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 MUC3AQ02505 3323 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 CHURC1-FNTBB4DL54 471 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 NPC1O15118 1278 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 BUB1O43683 1085 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 ASLP04424 464 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 RARAP10276 462 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 NTSR1P30989 418 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 NNMTP40261 264 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 SLC1A1P43005 524 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 KIR2DL1P43626 348 aaPredicted RBP19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 MAPKAPK2P49137 400 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 ZNF135P52742 658 aaPredicted RBP19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 CSTF1Q05048 431 aaKnown RBP19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 STARD3Q14849 445 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 CA9Q16790 459 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 PLEKHG6Q3KR16 790 aa19.69■□□□□ 0.74
HLA-DRB1-201ENST00000360004 RNF43Q68DV7 783 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms