RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 HCFC1R1Q9NWW0 138 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 SMPD4Q9NXE4 827 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 SHOC2Q9UQ13 582 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 ATP8A1Q9Y2Q0 1164 aa23.82■■□□□ 1.4
SDF4-202ENST00000360001 CLUHO75153 1309 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 NDC80O14777 642 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 CNTN5O94779 1100 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 CDC25CP30307 473 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 DENND1CQ8IV53 801 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 PPIL6Q8IXY8 311 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 PRCCQ92733 491 aaPredicted RBP23.81■■□□□ 1.4
SDF4-202ENST00000360001 TMEM248Q9NWD8 314 aa23.81■■□□□ 1.4
SDF4-202ENST00000360001 IRF1P10914 325 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 HDCP19113 662 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 HOXA9P31269 272 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 SLC6A4P31645 630 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 HSD17B3P37058 310 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 WASHC5Q12768 1159 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ANKRD22Q5VYY1 191 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ZCCHC9Q8N567 271 aaKnown RBP23.8■■□□□ 1.4
SDF4-202ENST00000360001 NAT8LQ8N9F0 302 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 DEPDC1BQ8WUY9 529 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 RPRD1AQ96P16 312 aaPredicted RBP23.8■■□□□ 1.4
SDF4-202ENST00000360001 A0A1W2PRU2 124 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 RNF103O00237 685 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 MYL4P12829 197 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 CCR2P41597 374 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 EPHA5P54756 1037 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 BASP1P80723 227 aaKnown RBP23.8■■□□□ 1.4
SDF4-202ENST00000360001 ZXDBP98169 803 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 C5orf22Q49AR2 442 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 C4orf22Q6V702 233 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ADGRD2Q7Z7M1 963 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 HOOK3Q86VS8 718 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 CCDC25Q86WR0 208 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ADAMTS19Q8TE59 1207 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 SLC39A8Q9C0K1 460 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ATXN3LQ9H3M9 355 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 NOL6Q9H6R4 1146 aaKnown RBP23.8■■□□□ 1.4
SDF4-202ENST00000360001 RAB6BQ9NRW1 208 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 ZNF212Q9UDV6 495 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 MSRAQ9UJ68 235 aa23.8■■□□□ 1.4
SDF4-202ENST00000360001 A0A0A0MRY4 1105 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 TCRBV7S3A2A0A539 114 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 GJA1P17302 382 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 SLMAPQ14BN4 828 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 ANKRD20A2Q5SQ80 823 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 ANKRD20A1Q5TYW2 823 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 ANKRD20A3Q5VUR7 823 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 PPP2R2DQ66LE6 453 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 TFAP2DQ7Z6R9 452 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 RBM23Q86U06 439 aaKnown RBP23.79■■□□□ 1.4
SDF4-202ENST00000360001 ARNTL2Q8WYA1 636 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 SPATA13Q96N96 652 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 FOXP3Q9BZS1 431 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 TSPYL1Q9H0U9 437 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 AGO1Q9UL18 857 aaKnown RBP23.79■■□□□ 1.4
SDF4-202ENST00000360001 HCFC2Q9Y5Z7 792 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 CPQQ9Y646 472 aa23.79■■□□□ 1.4
SDF4-202ENST00000360001 SHROOM3Q8TF72 1996 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 F5H5T6 163 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 KCNK1O00180 336 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 ZNF189O75820 626 aaPredicted RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 PMS2P54278 862 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 SMAD3P84022 425 aaKnown RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 RAB30Q15771 203 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 RFWD3Q6PCD5 774 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 CIR1Q86X95 450 aaPredicted RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 LGI2Q8N0V4 545 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 IQCKQ8N0W5 287 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 UMODL1-AS1Q8N2C9 162 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 MAB21L3Q8N8X9 362 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 GCNAQ96QF7 691 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 FERMT1Q9BQL6 677 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 FAM53CQ9NYF3 392 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 SEPT10Q9P0V9 454 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 CDH23Q9H251 3354 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 H0YGN5 161 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 DFFAO00273 331 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 STK10O94804 968 aaKnown RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 TMEM63AO94886 807 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 METTL18O95568 372 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 HNRNPA1P09651 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
SDF4-202ENST00000360001 ZNF33AQ06730 810 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 KCNJ11Q14654 390 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 STXBP5Q5T5C0 1151 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 ARHGAP36Q6ZRI8 547 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 TSGA13Q96PP4 275 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 CEP41Q9BYV8 373 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 EPB41L4BQ9H329 900 aa23.78■■□□□ 1.4
SDF4-202ENST00000360001 DNAJC17Q9NVM6 304 aaKnown RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 DNMT3BQ9UBC3 853 aaKnown RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 NYNRINQ9P2P1 1898 aaKnown RBP23.78■■□□□ 1.4
SDF4-202ENST00000360001 GREM1O60565 184 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 PTPN2P17706 415 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 GAD2Q05329 585 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 SPDYCQ5MJ68 293 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 FAXCQ5TGI0 409 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 ARHGEF18Q6ZSZ5 1173 aa23.77■■□□□ 1.4
SDF4-202ENST00000360001 CCDC13Q8IYE1 715 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms