RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 USH1CQ9Y6N9 552 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 TNFRSF10BO14763 440 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 UBOX5O94941 541 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 AP2A1O95782 977 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 INHAP05111 366 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 COL6A1P12109 1028 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 MGAT1P26572 445 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 NIPAL4Q0D2K0 466 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 FYB2Q5VWT5 728 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 BTBD8Q5XKL5 378 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 TIFABQ6ZNK6 161 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 TP53INP2Q8IXH6 220 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 COLGALT2Q8IYK4 626 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 NETO2Q8NC67 525 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF398Q8TD17 642 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 LRCH3Q96II8 777 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 HAPLN3Q96S86 360 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 CEP41Q9BYV8 373 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 ZCWPW1Q9H0M4 648 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 SZT2Q5T011 3432 aa15.27■□□□□ 0.04
GABPB1-202ENST00000359031 CFAP73A6NFT4 308 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 F5H423 210 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 KCNK1O00180 336 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 FGF10O15520 208 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 OAZ2O95190 189 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 IL1BP01584 269 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 HOXC13P31276 330 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 GRIK1P39086 918 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SESN2P58004 480 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SLC20A2Q08357 652 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 MBTPS1Q14703 1052 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 CRYMQ14894 314 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SPANXN3Q5MJ09 141 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 RMDN2Q96LZ7 410 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 DEFB118Q96PH6 123 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.03
GABPB1-202ENST00000359031 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SYBUQ9NX95 663 aa15.27■□□□□ 0.03
GABPB1-202ENST00000359031 SHROOM3Q8TF72 1996 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 A0A1W2PQ45 241 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 A0A1W2PQY0 241 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 F8W810 466 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 SOX1O00570 391 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 B4GALT3O60512 393 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 RFPL1O75677 317 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 DCTN3O75935 186 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 DDHD2O94830 711 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 ALDH3A1P30838 453 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 MGAT5Q09328 741 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 BNIP1Q12981 228 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 FRG1Q14331 258 aaKnown RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 PPP2R5DQ14738 602 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 NFE2Q16621 373 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 FAM133BQ5BKY9 247 aaKnown RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 OTOAQ7RTW8 1153 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 ZNF280BQ86YH2 543 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 TRIM42Q8IWZ5 723 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 SCAMP5Q8TAC9 235 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 C10orf82Q8WW14 230 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 FAM111AQ96PZ2 611 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 GORASP1Q9BQQ3 440 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 MANSC1Q9H8J5 431 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 SLC40A1Q9NP59 571 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 TBC1D13Q9NVG8 400 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 NEU3Q9UQ49 428 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 SNX10Q9Y5X0 201 aa15.26■□□□□ 0.03
GABPB1-202ENST00000359031 MYO18AQ92614 2054 aaKnown RBP15.26■□□□□ 0.03
GABPB1-202ENST00000359031 AP3B1O00203 1094 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 KLF11O14901 512 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 SYN3O14994 580 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 UGT1A9O60656 530 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 RASSF9O75901 435 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 POLBP06746 335 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 CCR1P32246 355 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 SKIV2L2P42285 1042 aaKnown RBP15.25■□□□□ 0.03
GABPB1-202ENST00000359031 SERPINB4P48594 390 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 BMPR2Q13873 1038 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 SLC39A12Q504Y0 691 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 TEX44Q53QW1 395 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 MANEALQ5VSG8 457 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 FBXW10Q5XX13 1052 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 KCTD11Q693B1 232 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 LZTR1Q8N653 840 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 FITM2Q8N6M3 262 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 ACMSDQ8TDX5 336 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 TBC1D31Q96DN5 1066 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 C8orf48Q96LL4 319 aa15.25■□□□□ 0.03
GABPB1-202ENST00000359031 TSGA13Q96PP4 275 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms