RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CHEK2O96017 543 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 LTFP02788 710 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 BDNFP23560 247 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 ARHGAP8P85298 464 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 TBL3Q12788 808 aaKnown RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CSHL1Q14406 222 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 PARP6Q2NL67 630 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 TFAP2DQ7Z6R9 452 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CMASQ8NFW8 434 aaPredicted RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 USP13Q92995 863 aaPredicted RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 DENND2DQ9H6A0 471 aaPredicted RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SYBUQ9NX95 663 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SIX4Q9UIU6 781 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CCDC189A1A4V9 331 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 DPPA5A6NC42 116 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 C22orf31O95567 290 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 ITGA2BP08514 1039 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 TSHRP16473 764 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SLC25A11Q02978 314 aaKnown RBP12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CCDC185Q8N715 623 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 PLLPQ9Y342 182 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CLUHO75153 1309 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 PSMD3O43242 534 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SUPT7LO94864 414 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 FBXO21O94952 628 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SMIM10L2AP0DMW4 78 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SMIM10L2BP0DMW5 78 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 ODC1P11926 461 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 GRIA1P42261 906 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 MATKP42679 507 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 PLK1P53350 603 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 RABGGTBP53611 331 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 ANO4Q32M45 955 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 BANPQ8N9N5 519 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 MAGEC3Q8TD91 643 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 APBB2Q92870 758 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 EME1Q96AY2 570 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 MCRS1Q96EZ8 462 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 CATSPER2Q96P56 530 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 OR12D3Q9UGF7 316 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
COL20A1-201ENST00000358894 HACD1B0YJ81 288 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 MFSD11O43934 449 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 S100BP04271 92 aaPredicted RBP12.52□□□□□ -0.4
COL20A1-201ENST00000358894 LHX1P48742 406 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 NAGLUP54802 743 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 C16orf89Q6UX73 402 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 CLPTM1LQ96KA5 538 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 ZFP42Q96MM3 310 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 ANKRD27Q96NW4 1050 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 NMRAL1Q9HBL8 299 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 ABCA3Q99758 1704 aa12.52□□□□□ -0.4
COL20A1-201ENST00000358894 PPEF2O14830 753 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 METTL18O95568 372 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 LMO2P25791 158 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SCNN1BP51168 640 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 CDH17Q12864 832 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 PACS1Q6VY07 963 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 WDTC1Q8N5D0 677 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 BLOC1S5Q8TDH9 187 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SEPT5Q99719 369 aaPredicted RBP12.52□□□□□ -0.41
COL20A1-201ENST00000358894 CAB39LQ9H9S4 337 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 ARHGEF3Q9NR81 526 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 NSMCE4AQ9NXX6 385 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SLC17A6Q9P2U8 582 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 LRCH1Q9Y2L9 728 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 AAR2Q9Y312 384 aaKnown RBP12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 DYTNA2CJ06 578 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 HCRTO43612 131 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 SNX2O60749 519 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 TADA2AO75478 443 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 TFE3P19532 575 aaPredicted RBP12.52□□□□□ -0.41
COL20A1-201ENST00000358894 NFKB1P19838 968 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 FAM83EQ2M2I3 478 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 PPM1JQ5JR12 505 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 MFSD14CQ5VZR4 134 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 LPPQ93052 612 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 PHF21BQ96EK2 531 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 NDNQ99608 321 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 CPNE1Q99829 537 aa12.52□□□□□ -0.41
COL20A1-201ENST00000358894 GSC2O15499 205 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CSH1P0DML2 217 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CSH2P0DML3 217 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 PSEN2P49810 448 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 SCNN1GP51170 649 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 NME5P56597 212 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 BLMHQ13867 455 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 MGAT5BQ3V5L5 792 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 GRTP1Q5TC63 336 aa12.51□□□□□ -0.41
COL20A1-201ENST00000358894 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms