RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SYPL2Q5VXT5 272 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
RFX3-202ENST00000358730 MYLK4Q86YV6 388 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 ADAM32Q8TC27 787 aa8.8□□□□□ -1
RFX3-202ENST00000358730 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 TMEM40Q8WWA1 233 aa8.8□□□□□ -1
RFX3-202ENST00000358730 FCRL3Q96P31 734 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 TTC1Q99614 292 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SYT15Q9BQS2 421 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DUSP16Q9BY84 665 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SHCBP1LQ9BZQ2 653 aa8.8□□□□□ -1
RFX3-202ENST00000358730 PRDM16Q9HAZ2 1276 aa8.8□□□□□ -1
RFX3-202ENST00000358730 ZNF358Q9NW07 568 aa8.8□□□□□ -1
RFX3-202ENST00000358730 RNF181Q9P0P0 153 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DLGAP2Q9P1A6 1054 aa8.8□□□□□ -1
RFX3-202ENST00000358730 MAGED2Q9UNF1 606 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 ADCY6O43306 1168 aa8.8□□□□□ -1
RFX3-202ENST00000358730 BAG2O95816 211 aa8.8□□□□□ -1
RFX3-202ENST00000358730 HOXD8P13378 290 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 ARRB2P32121 409 aa8.8□□□□□ -1
RFX3-202ENST00000358730 IDH3AP50213 366 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SERPINB8P50452 374 aa8.8□□□□□ -1
RFX3-202ENST00000358730 ABCE1P61221 599 aaKnown RBP8.8□□□□□ -1
RFX3-202ENST00000358730 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
RFX3-202ENST00000358730 INSCQ1MX18 579 aa8.8□□□□□ -1
RFX3-202ENST00000358730 VWA5B1Q5TIE3 1220 aa8.8□□□□□ -1
RFX3-202ENST00000358730 PDPK2PQ6A1A2 396 aa8.8□□□□□ -1
RFX3-202ENST00000358730 ATG14Q6ZNE5 492 aa8.8□□□□□ -1
RFX3-202ENST00000358730 HFE2Q6ZVN8 426 aa8.8□□□□□ -1
RFX3-202ENST00000358730 STRA8Q7Z7C7 330 aa8.8□□□□□ -1
RFX3-202ENST00000358730 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 TNS4Q8IZW8 715 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DCLK2Q8N568 766 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DNAAF3Q8N9W5 541 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
RFX3-202ENST00000358730 GSTCDQ8NEC7 633 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SLC7A14Q8TBB6 771 aa8.8□□□□□ -1
RFX3-202ENST00000358730 WNT8BQ93098 351 aa8.8□□□□□ -1
RFX3-202ENST00000358730 RBBP8Q99708 897 aa8.8□□□□□ -1
RFX3-202ENST00000358730 HNRNPABQ99729 332 aaKnown RBP8.8□□□□□ -1
RFX3-202ENST00000358730 MED10Q9BTT4 135 aa8.8□□□□□ -1
RFX3-202ENST00000358730 VCXQ9H320 206 aa8.8□□□□□ -1
RFX3-202ENST00000358730 FAM96AQ9H5X1 160 aa8.8□□□□□ -1
RFX3-202ENST00000358730 LRRC40Q9H9A6 602 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DNAJC28Q9NX36 388 aa8.8□□□□□ -1
RFX3-202ENST00000358730 VANGL2Q9ULK5 521 aa8.8□□□□□ -1
RFX3-202ENST00000358730 TSC2P49815 1807 aa8.8□□□□□ -1
RFX3-202ENST00000358730 A0A088AWK7 358 aa8.79□□□□□ -1
RFX3-202ENST00000358730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 FAM72CH0Y354 149 aa8.79□□□□□ -1
RFX3-202ENST00000358730 PDHXO00330 501 aa8.79□□□□□ -1
RFX3-202ENST00000358730 DCLK1O15075 740 aa8.79□□□□□ -1
RFX3-202ENST00000358730 USP1O94782 785 aa8.79□□□□□ -1
RFX3-202ENST00000358730 CPA3P15088 417 aa8.79□□□□□ -1
RFX3-202ENST00000358730 PTPN3P26045 913 aa8.79□□□□□ -1
RFX3-202ENST00000358730 ABCG1P45844 678 aa8.79□□□□□ -1
RFX3-202ENST00000358730 CCNHP51946 323 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 MAP3K7CLP57077 242 aa8.79□□□□□ -1
RFX3-202ENST00000358730 LILRA4P59901 499 aa8.79□□□□□ -1
RFX3-202ENST00000358730 CDC42EP1Q00587 391 aa8.79□□□□□ -1
RFX3-202ENST00000358730 GRTP1Q5TC63 336 aa8.79□□□□□ -1
RFX3-202ENST00000358730 FAM72AQ5TYM5 149 aa8.79□□□□□ -1
RFX3-202ENST00000358730 FAM72DQ6L9T8 149 aa8.79□□□□□ -1
RFX3-202ENST00000358730 IZUMO2Q6UXV1 221 aa8.79□□□□□ -1
RFX3-202ENST00000358730 CLEC20AQ6ZU45 233 aa8.79□□□□□ -1
RFX3-202ENST00000358730 FAM72BQ86X60 149 aa8.79□□□□□ -1
RFX3-202ENST00000358730 RNF169Q8NCN4 708 aa8.79□□□□□ -1
RFX3-202ENST00000358730 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
RFX3-202ENST00000358730 DNAJB3Q8WWF6 145 aa8.79□□□□□ -1
RFX3-202ENST00000358730 NT5C3BQ969T7 300 aa8.79□□□□□ -1
RFX3-202ENST00000358730 AZIN2Q96A70 460 aa8.79□□□□□ -1
RFX3-202ENST00000358730 SCOCQ9UIL1 159 aa8.79□□□□□ -1
RFX3-202ENST00000358730 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
RFX3-202ENST00000358730 TRIP12Q14669 1992 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 NRCAMQ92823 1304 aa8.79□□□□□ -1
RFX3-202ENST00000358730 ZNF236Q9UL36 1845 aa8.79□□□□□ -1
RFX3-202ENST00000358730 SMIM35A0A1B0GVV1 85 aa8.79□□□□□ -1
RFX3-202ENST00000358730 AP2A1O95782 977 aa8.79□□□□□ -1
RFX3-202ENST00000358730 ERCC2P18074 760 aa8.79□□□□□ -1
RFX3-202ENST00000358730 NCF2P19878 526 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 WARSP23381 471 aaKnown RBP8.79□□□□□ -1
RFX3-202ENST00000358730 SP100P23497 879 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 SPRP35270 261 aaPredicted RBP8.79□□□□□ -1
RFX3-202ENST00000358730 TKTL1P51854 596 aa8.79□□□□□ -1
RFX3-202ENST00000358730 RABGGTBP53611 331 aa8.79□□□□□ -1
RFX3-202ENST00000358730 LIMK2P53671 638 aa8.79□□□□□ -1
RFX3-202ENST00000358730 EPHB1P54762 984 aa8.79□□□□□ -1
RFX3-202ENST00000358730 TPI1P60174 286 aa8.79□□□□□ -1
RFX3-202ENST00000358730 DSG1Q02413 1049 aa8.79□□□□□ -1
RFX3-202ENST00000358730 SNX17Q15036 470 aa8.79□□□□□ -1
RFX3-202ENST00000358730 PCBP1Q15365 356 aaKnown RBP eCLIP8.79□□□□□ -1
RFX3-202ENST00000358730 CCDC153Q494R4 210 aa8.79□□□□□ -1
RFX3-202ENST00000358730 BNIPLQ7Z465 357 aa8.79□□□□□ -1
RFX3-202ENST00000358730 PLD6Q8N2A8 252 aaKnown RBP8.79□□□□□ -1
RFX3-202ENST00000358730 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
RFX3-202ENST00000358730 MAML3Q96JK9 1138 aa8.79□□□□□ -1
RFX3-202ENST00000358730 SLC2A13Q96QE2 648 aa8.79□□□□□ -1
RFX3-202ENST00000358730 AGAP2Q99490 1192 aa8.79□□□□□ -1
RFX3-202ENST00000358730 GORASP1Q9BQQ3 440 aa8.79□□□□□ -1
RFX3-202ENST00000358730 OXCT2Q9BYC2 517 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms