RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
NFIX-201ENST00000358552 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 MFSD11O43934 449 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 TLR5O60602 858 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 VNN2O95498 520 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 IGLV3-27P01718 113 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 RHOQP17081 205 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 PFKLP17858 780 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 GARSP41250 739 aaKnown RBP13.65□□□□□ -0.22
NFIX-201ENST00000358552 NDST2P52849 883 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 USP46P62068 366 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
NFIX-201ENST00000358552 KYNUQ16719 465 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 TNS4Q8IZW8 715 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 ZBTB9Q96C00 473 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 P2RY11Q96G91 374 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 ZNF512Q96ME7 567 aaPredicted RBP13.65□□□□□ -0.22
NFIX-201ENST00000358552 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
NFIX-201ENST00000358552 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
NFIX-201ENST00000358552 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
NFIX-201ENST00000358552 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 FAM72CH0Y354 149 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 GPR15P49685 360 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 UBE3AQ05086 875 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 EFEMP1Q12805 493 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PRPSAP1Q14558 356 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ANO4Q32M45 955 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 FAM72AQ5TYM5 149 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 FAM72DQ6L9T8 149 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 FAM72BQ86X60 149 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PALM2Q8IXS6 379 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 CCDC13Q8IYE1 715 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ZBED8Q8IZ13 594 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 RTL3Q8N8U3 475 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 HERVK_113Q902F9 699 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PLD4Q96BZ4 506 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 VN1R3Q9BXE9 311 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 EMILIN2Q9BXX0 1053 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ZYG11BQ9C0D3 744 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 NACA2Q9H009 215 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SIK2Q9H0K1 926 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ETNK1Q9HBU6 452 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 KIAA1671Q9BY89 1806 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 IGLV3-10A0A075B6K4 115 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 E9PAM4 449 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PRRG1O14668 218 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 TRDMT1O14717 391 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 LILRB3O75022 631 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 FGF18O76093 207 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ACSL3O95573 720 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 LATS1O95835 1130 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ADH1AP07327 375 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ATF6P18850 670 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SLC11A2P49281 568 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 TEX44Q53QW1 395 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SDHAF4Q5VUM1 108 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 CYS1Q717R9 158 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 CPLX4Q7Z7G2 160 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 LGMNQ99538 433 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
NFIX-201ENST00000358552 ANLNQ9NQW6 1124 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 SENP1Q9P0U3 644 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 NR2E3Q9Y5X4 410 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 ACTL7BQ9Y614 415 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 HS3ST4Q9Y661 456 aa13.64□□□□□ -0.23
NFIX-201ENST00000358552 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
NFIX-201ENST00000358552 SLC12A8A0AV02 714 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 ZNF840PA6NDX5 716 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 DRGXA6NNA5 263 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 I6L893 689 aaPredicted RBP13.63□□□□□ -0.23
NFIX-201ENST00000358552 RNF103O00237 685 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 C2CD2LO14523 706 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 APRTP07741 180 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 MMP13P45452 471 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 MAPKAPK2P49137 400 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 YBEYP58557 167 aaPredicted RBP13.63□□□□□ -0.23
NFIX-201ENST00000358552 RASIP1Q5U651 963 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 TTC19Q6DKK2 380 aaPredicted RBP13.63□□□□□ -0.23
NFIX-201ENST00000358552 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 PID1Q7Z2X4 250 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 PRUNE1Q86TP1 453 aa13.63□□□□□ -0.23
NFIX-201ENST00000358552 UMODL1-AS1Q8N2C9 162 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms