RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 PTCD3Q96EY7 689 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 PGAP3Q96FM1 320 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 CERS2Q96G23 380 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 NSL1Q96IY1 281 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 EPAS1Q99814 870 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 OR12D3Q9UGF7 316 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 EMCNQ9ULC0 261 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 INPP5FQ9Y2H2 1132 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 MGEA5O60502 916 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 AP2A1O95782 977 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 ODC1P11926 461 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 RPL9P32969 192 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 GMPRP36959 345 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 RPL10AP62906 217 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 FASTKD1Q53R41 847 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 CRLF3Q8IUI8 442 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 APOL2Q9BQE5 337 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 KCNK4Q9NYG8 393 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 NOP53Q9NZM5 478 aaKnown RBP16.23■□□□□ 0.19
PHTF1-201ENST00000357783 VANGL2Q9ULK5 521 aa16.23■□□□□ 0.19
PHTF1-201ENST00000357783 TDRD15B5MCY1 1934 aaKnown RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 GPR182O15218 404 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 BIRC5O15392 142 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 HNRNPCL1O60812 293 aaKnown RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 WFS1O76024 890 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 LRIG2O94898 1065 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 CD68P34810 354 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 HCAR3P49019 387 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 STX3Q13277 289 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 HSF5Q4G112 596 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 PPM1JQ5JR12 505 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 KYAT3Q6YP21 454 aaKnown RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 ATXN7L3BQ96GX2 97 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 TMEM209Q96SK2 561 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 EBF2Q9HAK2 575 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 SNNO75324 88 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 F9P00740 461 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 CXCR3P49682 368 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 AQP5P55064 265 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 MGAT3Q09327 533 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 CRHR2Q13324 411 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 NAB1Q13506 487 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 SPANXN3Q5MJ09 141 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 ACMSDQ8TDX5 336 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 GBA3Q9H227 469 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 HBS1LQ9Y450 684 aaKnown RBP16.22■□□□□ 0.19
PHTF1-201ENST00000357783 RAD54BQ9Y620 910 aa16.22■□□□□ 0.19
PHTF1-201ENST00000357783 NCAM2O15394 837 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 CCDC22O60826 627 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GLRA3O75311 464 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GSRP00390 522 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GM2AP17900 193 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 NFKB1P19838 968 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 KCNA4P22459 653 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GARSP41250 739 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GALNT2Q10471 571 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 RAB3IL1Q8TBN0 382 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 MLPHQ9BV36 600 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 CADM1Q9BY67 442 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 TLE6Q9H808 572 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 LRRC40Q9H9A6 602 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 ZFYVE28Q9HCC9 887 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 CSNK1G1Q9HCP0 422 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 RRN3Q9NYV6 651 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 UBP1Q9NZI7 540 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 BFARQ9NZS9 450 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 NKX1-2Q9UD57 310 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 ATP9BO43861 1147 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 CYBAP13498 195 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 MX2P20592 715 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 GP5P40197 560 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 INTS6LQ5JSJ4 861 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 CERCAMQ5T4B2 595 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 METTL23Q86XA0 190 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 SCAMP5Q8TAC9 235 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 TRIB2Q92519 343 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 HDAC11Q96DB2 347 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 BTBD10Q9BSF8 475 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 TACO1Q9BSH4 297 aaKnown RBP16.21■□□□□ 0.19
PHTF1-201ENST00000357783 TUBB6Q9BUF5 446 aa16.21■□□□□ 0.19
PHTF1-201ENST00000357783 PLIN3O60664 434 aa16.2■□□□□ 0.18
PHTF1-201ENST00000357783 DIAPH2O60879 1101 aa16.2■□□□□ 0.18
PHTF1-201ENST00000357783 LYPLA1O75608 230 aaPredicted RBP16.2■□□□□ 0.18
PHTF1-201ENST00000357783 RPSAP08865 295 aaKnown RBP16.2■□□□□ 0.18
PHTF1-201ENST00000357783 SRGAP2BP0DMP2 458 aa16.2■□□□□ 0.18
PHTF1-201ENST00000357783 ESRRAP11474 423 aaPredicted RBP16.2■□□□□ 0.18
PHTF1-201ENST00000357783 YY1P25490 414 aa16.2■□□□□ 0.18
PHTF1-201ENST00000357783 TYK2P29597 1187 aa16.2■□□□□ 0.18
PHTF1-201ENST00000357783 KRT72Q14CN4 511 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms